regulation of transcription from RNA polymerase II promoter	30.384531
positive regulation of gene expression	27.892942
negative regulation of RNA metabolic process	25.252761
negative regulation of transcription, DNA-dependent	25.252761
negative regulation of cellular macromolecule biosynthetic process	25.250842
negative regulation of nitrogen compound metabolic process	24.689646
negative regulation of nucleobase-containing compound metabolic process	24.689646
negative regulation of macromolecule biosynthetic process	24.666941
positive regulation of transcription from RNA polymerase II promoter	24.620992
negative regulation of cellular biosynthetic process	23.939583
negative regulation of cellular metabolic process	23.733950
negative regulation of biosynthetic process	23.610030
negative regulation of macromolecule metabolic process	22.443809
negative regulation of gene expression	21.869116
negative regulation of transcription from RNA polymerase II promoter	21.858185
positive regulation of nucleobase-containing compound metabolic process	21.302398
negative regulation of metabolic process	21.125964
positive regulation of nitrogen compound metabolic process	21.069001
positive regulation of transcription, DNA-dependent	20.489709
positive regulation of RNA metabolic process	19.733095
positive regulation of metabolic process	18.483602
positive regulation of macromolecule metabolic process	18.359932
regulation of developmental process	17.324803
positive regulation of macromolecule biosynthetic process	16.952121
regulation of cell differentiation	16.698067
positive regulation of biosynthetic process	16.626128
positive regulation of cellular biosynthetic process	16.626128
positive regulation of cellular metabolic process	15.781755
regulation of multicellular organismal development	15.319766
organ development	14.984015
tissue development	14.718227
epithelium development	13.825165
anatomical structure morphogenesis	13.014097
cellular developmental process	12.798795
system development	12.533196
cell differentiation	12.110680
negative regulation of cellular process	11.812790
cellular response to chemical stimulus	11.291514
regulation of multicellular organismal process	11.163335
negative regulation of developmental process	11.069802
regulation of cell proliferation	11.056783
positive regulation of cell differentiation	11.041454
response to chemical stimulus	10.704578
negative regulation of cell proliferation	10.676792
negative regulation of biological process	10.617995
cell development	10.593576
organ morphogenesis	9.758219
multicellular organismal development	9.737669
negative regulation of cell differentiation	9.394251
tube development	9.256088
response to growth factor stimulus	9.219457
anatomical structure development	9.178064
positive regulation of developmental process	9.011803
transcription from RNA polymerase II promoter	8.977361
mammary gland epithelium development	8.899355
cellular response to hormone stimulus	8.823197
cognition	8.707783
learning or memory	8.707783
cellular response to organic substance	8.662704
regulation of nitrogen compound metabolic process	8.652339
regulation of nucleobase-containing compound metabolic process	8.270855
tissue morphogenesis	8.216105
cardiovascular system development	8.099183
circulatory system development	8.099183
autonomic nervous system development	8.084843
response to external stimulus	7.656414
cell morphogenesis involved in differentiation	7.469273
cellular response to growth factor stimulus	7.466744
DNA-dependent transcription, initiation	7.316693
gland development	7.254648
morphogenesis of an epithelium	7.075758
transcription, DNA-dependent	7.037791
regulation of epithelial cell differentiation	7.016002
response to calcium ion	6.918323
cell maturation	6.902572
cell morphogenesis	6.893766
cellular macromolecule biosynthetic process	6.884373
developmental process	6.866210
cellular component morphogenesis	6.803108
cellular response to steroid hormone stimulus	6.777701
smooth muscle tissue development	6.700986
developmental maturation	6.659136
tube morphogenesis	6.645893
regulation of anatomical structure morphogenesis	6.556544
myeloid cell differentiation	6.549990
negative regulation of signal transduction	6.509494
gland morphogenesis	6.413571
negative regulation of response to stimulus	6.325967
regulation of epithelial cell proliferation	6.285551
heart morphogenesis	6.250155
pattern specification process	6.167615
cellular response to endogenous stimulus	6.143224
negative regulation of angiogenesis	6.114406
negative regulation of epithelial cell proliferation	6.087822
learning	6.071023
negative regulation of cell communication	5.921821
negative regulation of signaling	5.921821
cellular response to interleukin-1	5.832967
regulation of chromosome organization	5.825260
macromolecule biosynthetic process	5.742680
heart development	5.721654
sympathetic nervous system development	5.689292
response to metal ion	5.663230
cellular response to nutrient levels	5.367303
mammary gland development	5.358048
myeloid leukocyte differentiation	5.302810
negative regulation of myeloid cell differentiation	5.165399
regulation of cell communication	5.123804
axon guidance	5.109044
response to organic substance	5.096123
response to endogenous stimulus	5.065244
transmembrane receptor protein serine/threonine kinase signaling pathway	5.027957
muscle structure development	4.975054
positive regulation of cell proliferation	4.972338
RNA biosynthetic process	4.866676
response to hormone stimulus	4.805302
regulation of histone modification	4.768164
mammary gland duct morphogenesis	4.745905
M/G1 transition of mitotic cell cycle	4.673990
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	4.673990
negative regulation of ligase activity	4.673990
negative regulation of ubiquitin-protein ligase activity	4.673990
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	4.673990
positive regulation of ligase activity	4.673990
positive regulation of ubiquitin-protein ligase activity	4.673990
positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	4.673990
regulation of ligase activity	4.673990
regulation of ubiquitin-protein ligase activity	4.673990
regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	4.673990
S phase	4.615684
S phase of mitotic cell cycle	4.615684
cellular response to inorganic substance	4.599706
cellular response to metal ion	4.599706
epithelial tube morphogenesis	4.594724
intracellular receptor mediated signaling pathway	4.557630
regulation of sequence-specific DNA binding transcription factor activity	4.556285
positive regulation of biological process	4.546057
regulation of body fluid levels	4.508537
regulation of immune response	4.496243
enzyme linked receptor protein signaling pathway	4.388622
response to radiation	4.372320
cellular response to external stimulus	4.349108
positive regulation of cellular process	4.340366
regulation of fat cell differentiation	4.321371
T cell receptor signaling pathway	4.258835
cellular response to calcium ion	4.226158
regulation of osteoblast differentiation	4.165020
branching morphogenesis of a tube	4.164755
response to insulin stimulus	4.157917
urogenital system development	4.100051
response to inorganic substance	4.092840
nervous system development	4.083698
positive regulation of epithelial cell proliferation	4.079868
regulation of epidermis development	4.073816
regulation of RNA metabolic process	4.059990
cellular response to extracellular stimulus	4.017403
negative regulation of lipid biosynthetic process	4.012190
negative regulation of steroid biosynthetic process	4.012190
negative regulation of steroid metabolic process	4.012190
mammary gland morphogenesis	3.956893
regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	3.952464
negative regulation of protein ubiquitination	3.942989
epithelial cell differentiation	3.933085
I-kappaB kinase/NF-kappaB cascade	3.902290
skeletal system development	3.889387
inner ear morphogenesis	3.843378
embryo development	3.792205
cellular response to tumor necrosis factor	3.778928
columnar/cuboidal epithelial cell differentiation	3.756862
cartilage development	3.756040
axonogenesis	3.669432
neuron development	3.649780
regulation of molecular function	3.621198
response to mineralocorticoid stimulus	3.619495
regulation of RNA biosynthetic process	3.611618
regulation of transcription, DNA-dependent	3.611618
locomotion	3.586053
positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	3.555047
negative regulation of lipid metabolic process	3.536308
nerve growth factor receptor signaling pathway	3.532302
cellular response to peptide hormone stimulus	3.526895
mesenchymal cell development	3.515708
regulation of immune system process	3.461090
protein polyubiquitination	3.458805
connective tissue development	3.386741
cardiac epithelial to mesenchymal transition	3.378010
regulation of neuronal synaptic plasticity	3.377254
response to stimulus	3.360892
bone development	3.333330
bone morphogenesis	3.333330
positive regulation of osteoblast differentiation	3.317185
retina development in camera-type eye	3.316516
negative regulation of binding	3.296245
regulation of long-term neuronal synaptic plasticity	3.268945
neuron projection morphogenesis	3.268108
multicellular organismal process	3.265108
morphogenesis of a branching epithelium	3.253848
cell part morphogenesis	3.232770
cell projection morphogenesis	3.232770
regulation of DNA binding	3.231628
placenta development	3.211244
rhythmic process	3.188264
regulation of protein metabolic process	3.172511
cellular biosynthetic process	3.165466
response to abiotic stimulus	3.144786
circadian rhythm	3.133546
regulation of cytokine production	3.122845
central nervous system development	3.079506
immune system process	3.072858
cell proliferation	3.067383
lymphocyte activation	3.037532
branching involved in mammary gland duct morphogenesis	3.035576
response to light stimulus	3.030671
negative regulation of MAPK cascade	3.012979
regulation of erythrocyte differentiation	3.006717