programmed cell death	28.494050
apoptotic process	27.495097
cellular macromolecule metabolic process	27.177581
macromolecule metabolic process	26.119163
cellular response to stress	25.304287
cell death	22.618518
death	22.103070
cellular metabolic process	21.696331
primary metabolic process	19.305215
metabolic process	18.572833
regulation of response to stress	17.097730
toll-like receptor 4 signaling pathway	16.611096
MyD88-independent toll-like receptor signaling pathway	16.611096
TRIF-dependent toll-like receptor signaling pathway	15.955084
Toll signaling pathway	15.955084
toll-like receptor 3 signaling pathway	15.955084
positive regulation of protein phosphorylation	15.731911
pattern recognition receptor signaling pathway	15.515883
toll-like receptor signaling pathway	15.515883
regulation of protein metabolic process	15.242475
positive regulation of protein kinase activity	14.897249
positive regulation of phosphorylation	14.314008
induction of apoptosis	14.060817
induction of programmed cell death	14.060817
positive regulation of phosphate metabolic process	13.871549
positive regulation of phosphorus metabolic process	13.871549
protein phosphorylation	13.774478
regulation of cellular protein metabolic process	13.732390
regulation of protein modification process	13.625767
phosphorylation	13.575301
negative regulation of gene expression	13.379936
chromatin organization	13.209880
positive regulation of kinase activity	12.951158
positive regulation of protein modification process	12.849793
positive regulation of transferase activity	12.739633
positive regulation of defense response	12.717180
cellular protein metabolic process	12.691230
MAPK cascade	12.665090
toll-like receptor 1 signaling pathway	12.612542
toll-like receptor 2 signaling pathway	12.612542
cellular process	12.587391
positive regulation of molecular function	12.461868
activation of innate immune response	12.322049
innate immune response-activating signal transduction	12.322049
negative regulation of RNA metabolic process	12.310416
negative regulation of transcription, DNA-dependent	12.310416
DNA metabolic process	12.281654
positive regulation of cellular protein metabolic process	12.193313
macromolecular complex subunit organization	12.161462
negative regulation of cellular macromolecule biosynthetic process	12.112968
cellular component organization	12.052922
activation of protein kinase activity	11.860192
cellular component organization or biogenesis	11.836189
negative regulation of nitrogen compound metabolic process	11.788155
negative regulation of nucleobase-containing compound metabolic process	11.788155
regulation of protein phosphorylation	11.694123
response to stress	11.613276
MyD88-dependent toll-like receptor signaling pathway	11.579125
positive regulation of innate immune response	11.565093
response to endoplasmic reticulum stress	11.460779
positive regulation of protein metabolic process	11.252639
negative regulation of macromolecule biosynthetic process	11.232156
stress-activated MAPK cascade	11.228639
stress-activated protein kinase signaling cascade	11.228639
cell cycle checkpoint	11.087818
positive regulation of response to stimulus	11.084541
negative regulation of macromolecule metabolic process	11.045806
negative regulation of cellular biosynthetic process	11.037286
protein metabolic process	11.028215
macromolecular complex assembly	10.968487
chromosome organization	10.966545
interspecies interaction between organisms	10.918250
cellular component organization at cellular level	10.917796
cellular protein modification process	10.761379
protein modification process	10.761379
cellular component organization or biogenesis at cellular level	10.760154
response to gamma radiation	10.734644
positive regulation of catalytic activity	10.716223
regulation of interphase of mitotic cell cycle	10.710836
negative regulation of biosynthetic process	10.679439
response to UV	10.573815
negative regulation of metabolic process	10.444934
positive regulation of protein serine/threonine kinase activity	10.259895
phosphate-containing compound metabolic process	10.230927
phosphorus metabolic process	10.230927
regulation of intracellular protein kinase cascade	10.182020
organelle organization	10.134923
regulation of innate immune response	10.103462
nucleosome assembly	10.069077
regulation of phosphorylation	9.988838
macromolecule modification	9.922827
regulation of phosphate metabolic process	9.921767
regulation of phosphorus metabolic process	9.921767
negative regulation of transcription from RNA polymerase II promoter	9.906429
regulation of defense response	9.767935
regulation of protein kinase activity	9.750479
cellular component assembly	9.664870
regulation of cell cycle process	9.622902
response to DNA damage stimulus	9.555945
intracellular protein kinase cascade	9.543272
nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway	9.517135
regulation of transferase activity	9.494136
nucleic acid metabolic process	9.445892
protein-DNA complex assembly	9.397234
regulation of G1/S transition of mitotic cell cycle	9.378117
immune response-activating signal transduction	9.369562
chromatin assembly	9.355728
negative regulation of cellular metabolic process	9.318898
cellular response to unfolded protein	9.312356
endoplasmic reticulum unfolded protein response	9.312356
regulation of cell cycle arrest	9.311065
cytoplasmic pattern recognition receptor signaling pathway	9.277611
activation of MAPK activity	9.273391
positive regulation of immune response	9.268976
regulation of cell death	9.213037
induction of apoptosis by intracellular signals	9.123262
fibroblast growth factor receptor signaling pathway	9.069059
nucleosome organization	9.002442
regulation of programmed cell death	8.975110
positive regulation of MAP kinase activity	8.972294
mitotic cell cycle checkpoint	8.961431
chromatin assembly or disassembly	8.891039
positive regulation of signaling	8.815325
regulation of organelle organization	8.647007
regulation of cell cycle	8.560902
cellular component biogenesis	8.556924
regulation of apoptotic process	8.531173
regulation of kinase activity	8.502501
cell-type specific apoptotic process	8.481898
response to abiotic stimulus	8.471942
cell cycle arrest	8.439115
activation of immune response	8.432246
ER-nucleus signaling pathway	8.411523
positive regulation of cell communication	8.396487
positive regulation of signal transduction	8.392651
cellular response to topologically incorrect protein	8.330306
nucleobase-containing compound metabolic process	8.326782
negative regulation of cell cycle	8.303709
regulation of molecular function	8.267609
nitrogen compound metabolic process	8.221749
positive regulation of intracellular protein kinase cascade	8.215492
protein-DNA complex subunit organization	8.195946
positive regulation of apoptotic process	8.121972
positive regulation of cell death	8.121972
positive regulation of programmed cell death	8.121972
DNA damage checkpoint	8.041044
DNA integrity checkpoint	8.041044
cellular nitrogen compound metabolic process	7.955418
G1/S transition checkpoint	7.955318
mitotic cell cycle G1/S transition checkpoint	7.955318
positive regulation of hydrolase activity	7.915477
regulation of immune system process	7.888835
cellular response to fibroblast growth factor stimulus	7.883396
response to fibroblast growth factor stimulus	7.883396
immune response-regulating signaling pathway	7.775764
activation of MAPKK activity	7.688321
DNA packaging	7.637396
regulation of signaling	7.637003
regulation of MAP kinase activity	7.560608
histone modification	7.453328
positive regulation of peptidase activity	7.439822
nerve growth factor receptor signaling pathway	7.431663
signal transduction in response to DNA damage	7.411598
cell cycle process	7.321140
negative regulation of biological process	7.307421
positive regulation of cysteine-type endopeptidase activity	7.286997
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	7.286997
positive regulation of endopeptidase activity	7.286997
DNA conformation change	7.253798
cellular macromolecular complex subunit organization	7.217103
regulation of type I interferon production	7.205842
regulation of catalytic activity	7.186951
regulation of mitotic cell cycle	7.111793
cellular protein catabolic process	6.967752
proteolysis involved in cellular protein catabolic process	6.967752
intracellular signal transduction	6.961703
cellular response to radiation	6.948496
regulation of signal transduction	6.892395
regulation of cysteine-type endopeptidase activity	6.867916
regulation of cysteine-type endopeptidase activity involved in apoptotic process	6.867916
positive regulation of immune system process	6.855023
proteasomal protein catabolic process	6.851866
proteasomal ubiquitin-dependent protein catabolic process	6.851866
negative regulation of growth	6.799361
interphase	6.784478
interphase of mitotic cell cycle	6.784478
response to decreased oxygen levels	6.758292
response to hypoxia	6.758292
G1/S transition of mitotic cell cycle	6.692726
multi-organism process	6.684983
covalent chromatin modification	6.679158
regulation of cell communication	6.677910
positive regulation of sequence-specific DNA binding transcription factor activity	6.558703
positive regulation of NF-kappaB transcription factor activity	6.558609
regulation of cytokine production	6.557561
JNK cascade	6.556900
response to light stimulus	6.547590
viral reproductive process	6.539339
cell cycle	6.522369
response to ionizing radiation	6.498722
cellular macromolecular complex assembly	6.470361
cellular response to abiotic stimulus	6.435078
release of cytochrome c from mitochondria	6.423863
response to oxygen levels	6.393073
regulation of cellular response to stress	6.324597
DNA damage response, signal transduction by p53 class mediator	6.274140
signal transduction by p53 class mediator	6.274140
negative regulation of cellular process	6.233754
regulation of I-kappaB kinase/NF-kappaB cascade	6.168703
positive regulation of protein transport	6.159508
mitotic cell cycle G1/S transition DNA damage checkpoint	6.146597
modification-dependent macromolecule catabolic process	6.115482
modification-dependent protein catabolic process	6.115482
regulation of peptidase activity	6.113605
cellular response to chemical stimulus	6.106120
nucleotide-binding oligomerization domain containing signaling pathway	6.102677
immune system process	6.100939
regulation of chromosome organization	6.095663
regulation of hydrolase activity	6.086018
regulation of stress-activated MAPK cascade	6.071404
regulation of stress-activated protein kinase signaling cascade	6.071404
neuron apoptotic process	6.046730
neuron death	6.046730
regulation of apoptotic signaling pathway	5.945643
regulation of protein serine/threonine kinase activity	5.936282
protein catabolic process	5.924906
cellular macromolecule catabolic process	5.893608
response to radiation	5.885898
regulation of endopeptidase activity	5.874640
chromatin modification	5.833495
DNA damage response, signal transduction resulting in induction of apoptosis	5.823397
regulation of sequence-specific DNA binding transcription factor activity	5.759459
regulation of DNA metabolic process	5.726099
regulation of immune response	5.717367
cellular response to organic substance	5.701231
response to growth factor stimulus	5.650516
macromolecule catabolic process	5.503069
regulation of MAPK cascade	5.492591
positive regulation of cytokine production	5.479351
activation of cysteine-type endopeptidase activity	5.471706
activation of cysteine-type endopeptidase activity involved in apoptotic process	5.471706
cellular response to growth factor stimulus	5.467927
regulation of response to stimulus	5.454771
myoblast differentiation	5.417214
apoptotic mitochondrial changes	5.409267
cellular response to ionizing radiation	5.340140
ubiquitin-dependent protein catabolic process	5.339637
negative regulation of cell growth	5.314481
regulation of cellular component organization	5.292973
regulation of ERK1 and ERK2 cascade	5.286265
antigen receptor-mediated signaling pathway	5.280015
positive regulation of apoptotic signaling pathway	5.227837
negative regulation of mitotic cell cycle	5.202215
regulation of transport	5.188153
SRP-dependent cotranslational protein targeting to membrane	5.155631
cotranslational protein targeting to membrane	5.155631
establishment of protein localization in endoplasmic reticulum	5.155631
protein localization in endoplasmic reticulum	5.155631
protein targeting to ER	5.155631
proteolysis	5.104786
regulation of multicellular organismal process	5.101905
regulation of biological quality	5.092953
ERBB signaling pathway	5.008268
epidermal growth factor receptor signaling pathway	5.008268
anti-apoptosis	4.990060
negative regulation of molecular function	4.981094
mitochondrion organization	4.962087
viral infectious cycle	4.934555
signal transduction involved in DNA damage checkpoint	4.928690
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	4.928690
signal transduction involved in DNA integrity checkpoint	4.928690
signal transduction involved in G1/S transition checkpoint	4.928690
signal transduction involved in cell cycle checkpoint	4.928690
signal transduction involved in mitotic cell cycle G1/S checkpoint	4.928690
signal transduction involved in mitotic cell cycle G1/S transition DNA damage checkpoint	4.928690
signal transduction involved in mitotic cell cycle checkpoint	4.928690
transmembrane receptor protein tyrosine kinase signaling pathway	4.854174
regulation of cell growth	4.847099
regulation of histone modification	4.842976
regulation of cytokine biosynthetic process	4.832841
positive regulation of I-kappaB kinase/NF-kappaB cascade	4.812185
regulation of protein localization	4.781620
cellular component assembly at cellular level	4.723790
apoptotic signaling pathway	4.708755
positive regulation of intracellular protein transport	4.705435
positive regulation of intracellular transport	4.705435
negative regulation of protein metabolic process	4.693880
response to organic substance	4.686774
negative regulation of type I interferon production	4.655891
positive regulation of multicellular organismal process	4.632825
negative regulation of cell death	4.628724
mitotic cell cycle	4.618010
cellular macromolecule localization	4.566966
cellular protein localization	4.566966
regulation of homeostatic process	4.562157
regulation of cellular localization	4.545825
immune response-activating cell surface receptor signaling pathway	4.509411
regulation of intracellular transport	4.492040
response to unfolded protein	4.440297
response to hydrogen peroxide	4.431941
response to oxidative stress	4.426956
protein targeting	4.403619
response to chemical stimulus	4.386995
response to insulin stimulus	4.350374
regulation of protein catabolic process	4.350239
positive regulation of protein secretion	4.334154
response to lipopolysaccharide	4.319872
negative regulation of cell cycle process	4.296248
protein complex subunit organization	4.286138
regulation of wound healing	4.286138
positive regulation of ERK1 and ERK2 cascade	4.196429
regulation of establishment of protein localization	4.191837
induction of apoptosis by extracellular signals	4.182652
regulation of transcription involved in G1/S phase of mitotic cell cycle	4.163141
negative regulation of apoptotic process	4.159783
G1 phase	4.147022
G1 phase of mitotic cell cycle	4.147022
positive regulation of type I interferon production	4.146728
protein targeting to membrane	4.142306
viral genome expression	4.138894
viral transcription	4.138894
regulation of peptidyl-tyrosine phosphorylation	4.137505
regulation of nucleocytoplasmic transport	4.103963
protein processing	4.095407
response to topologically incorrect protein	4.069909
lipopolysaccharide-mediated signaling pathway	4.065367
cellular response to starvation	4.054011
immune system development	4.046743
hemopoietic or lymphoid organ development	4.029584
response to bacterium	4.019314
response to external stimulus	3.989130
positive regulation of nucleocytoplasmic transport	3.987616
cellular response to tumor necrosis factor	3.976504
negative regulation of cytokine production	3.976071
intracellular transport	3.965855
cellular response to drug	3.956326
regulation of localization	3.929939
response to reactive oxygen species	3.920318
regulation of DNA replication	3.907036
DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis	3.893977
signal transduction by p53 class mediator resulting in induction of apoptosis	3.893977
response to molecule of bacterial origin	3.875251
negative regulation of programmed cell death	3.843737
enzyme linked receptor protein signaling pathway	3.836902
T cell receptor signaling pathway	3.815856
positive regulation of cell cycle process	3.814084
intracellular protein transport	3.810330
regulation of neuron apoptotic process	3.801562
regulation of neuron death	3.801562
response to exogenous dsRNA	3.794810
negative regulation of response to stimulus	3.781723
viral reproduction	3.769005
cellular response to stimulus	3.758754
positive regulation of cell cycle arrest	3.754715
protein import	3.737736
regulation of intracellular protein transport	3.736386
homeostasis of number of cells	3.728510
activation of pro-apoptotic gene products	3.677368
regulation of cell differentiation	3.664629
regulation of JNK cascade	3.661656
maintenance of protein location	3.658769
maintenance of protein location in cell	3.658769
negative regulation of cellular component organization	3.612579
response to acid	3.583461
epithelial cell proliferation	3.567058
regulation of growth	3.553846
protein localization to organelle	3.521875
regulation of myeloid cell differentiation	3.494557
positive regulation of organelle organization	3.487828
cellular response to biotic stimulus	3.466529
regulation of kidney development	3.438726
mitochondrial membrane organization	3.436346
activation of signaling protein activity involved in unfolded protein response	3.410344
regulation of canonical Wnt receptor signaling pathway	3.387567
maintenance of location	3.386378
negative regulation of protein modification process	3.380885
regulation of body fluid levels	3.350162
proximal/distal pattern formation	3.346467
cell activation	3.337732
cellular membrane organization	3.335029
membrane organization	3.335029
protein complex assembly	3.329370
protein complex biogenesis	3.329370
DNA repair	3.319615
regulation of protein import into nucleus	3.314550
regulation of protein localization to nucleus	3.314550
immune response-regulating cell surface receptor signaling pathway	3.312039
regulation of protein transport	3.308450
response to dsRNA	3.278086
ER-associated protein catabolic process	3.264654
regulation of response to external stimulus	3.262663
response to drug	3.259521
regulation of neuronal synaptic plasticity	3.249405
negative regulation of NF-kappaB transcription factor activity	3.247396
negative regulation of catabolic process	3.247396
regulation of peptidyl-serine phosphorylation	3.247396
regulation of tyrosine phosphorylation of STAT protein	3.247396
transforming growth factor beta receptor signaling pathway	3.236031
hemopoiesis	3.235251
leukocyte migration	3.232622
regulation of binding	3.229036
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	3.197080
negative regulation of cellular protein metabolic process	3.178853
establishment of localization	3.175679
regulation of epithelial cell differentiation	3.168530
response to tumor necrosis factor	3.163096
positive regulation of protein oligomerization	3.156605
regulation of protein oligomerization	3.156605
regulation of smooth muscle cell differentiation	3.155816
digestive tract development	3.145724
maintenance of location in cell	3.143421
negative regulation of organelle organization	3.143421
protein homooligomerization	3.143421
axon guidance	3.141219
G2/M transition checkpoint	3.135489
negative regulation of protein catabolic process	3.135489
peptidyl-serine modification	3.135489
peptidyl-serine phosphorylation	3.135489
positive regulation of Wnt receptor signaling pathway	3.135489
positive regulation of cytokine secretion	3.135489
positive regulation of peptidyl-serine phosphorylation	3.135489
positive regulation of striated muscle cell differentiation	3.135489
receptor metabolic process	3.135489
regulation of protein kinase B signaling cascade	3.135489
myeloid cell differentiation	3.122308
nuclear transport	3.107930
nucleocytoplasmic transport	3.107930
response to starvation	3.096162
monocyte differentiation	3.092217
protein modification by small protein conjugation or removal	3.084246
Notch signaling pathway	3.080075
positive regulation of protein import into nucleus	3.055736
positive regulation of transmembrane transport	3.055736
leukocyte differentiation	3.043780
response to biotic stimulus	3.038989
regulation of extrinsic apoptotic signaling pathway	3.032943
regulation of lipid storage	3.012617