DNA metabolic process	14.175596
nucleosome assembly	11.898306
chromatin assembly	11.245085
nucleosome organization	11.245085
protein-DNA complex assembly	11.245040
cellular response to stress	11.103763
cellular macromolecular complex subunit organization	11.021885
macromolecular complex subunit organization	10.826573
protein-DNA complex subunit organization	10.587258
cellular macromolecular complex assembly	10.484108
chromatin assembly or disassembly	10.444742
macromolecular complex assembly	10.384943
positive regulation of defense response	9.988181
regulation of response to stress	9.958110
induction of apoptosis	9.770095
induction of programmed cell death	9.770095
response to stress	9.742287
positive regulation of immune response	9.738430
JNK cascade	9.664612
DNA packaging	9.660311
DNA conformation change	9.428498
activation of MAPK activity	9.195127
DNA repair	9.083802
toll-like receptor 1 signaling pathway	8.802441
toll-like receptor 2 signaling pathway	8.802441
MyD88-dependent toll-like receptor signaling pathway	8.758697
stress-activated MAPK cascade	8.741807
stress-activated protein kinase signaling cascade	8.741807
regulation of defense response	8.668849
positive regulation of MAP kinase activity	8.613686
TRIF-dependent toll-like receptor signaling pathway	8.530816
Toll signaling pathway	8.530816
toll-like receptor 3 signaling pathway	8.530816
activation of innate immune response	8.530813
innate immune response-activating signal transduction	8.530813
immune response-activating signal transduction	8.530568
cellular component assembly	8.433698
regulation of innate immune response	8.400960
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	8.391857
signal transduction involved in DNA damage checkpoint	8.391857
signal transduction involved in DNA integrity checkpoint	8.391857
signal transduction involved in G1/S transition checkpoint	8.391857
signal transduction involved in cell cycle checkpoint	8.391857
signal transduction involved in mitotic cell cycle G1/S checkpoint	8.391857
signal transduction involved in mitotic cell cycle G1/S transition DNA damage checkpoint	8.391857
signal transduction involved in mitotic cell cycle checkpoint	8.391857
positive regulation of innate immune response	8.374419
MyD88-independent toll-like receptor signaling pathway	8.367492
toll-like receptor 4 signaling pathway	8.367492
response to DNA damage stimulus	8.316558
DNA damage checkpoint	8.286207
DNA integrity checkpoint	8.286207
nucleotide-binding oligomerization domain containing signaling pathway	8.179630
cell death	8.060166
G1 phase	8.058835
G1 phase of mitotic cell cycle	8.058835
pattern recognition receptor signaling pathway	8.036928
toll-like receptor signaling pathway	8.036928
activation of immune response	8.036699
positive regulation of protein serine/threonine kinase activity	7.997324
death	7.977273
positive regulation of protein metabolic process	7.958268
regulation of G1/S transition of mitotic cell cycle	7.940859
induction of apoptosis by extracellular signals	7.887550
mitotic cell cycle checkpoint	7.864521
cellular component biogenesis	7.786976
immune response-activating cell surface receptor signaling pathway	7.774935
regulation of cellular protein metabolic process	7.763801
immune response-regulating signaling pathway	7.744922
mitotic cell cycle G1/S transition DNA damage checkpoint	7.702911
regulation of immune response	7.678289
positive regulation of cell cycle arrest	7.606121
regulation of protein metabolic process	7.570218
regulation of MAP kinase activity	7.528032
regulation of interphase of mitotic cell cycle	7.509161
positive regulation of cellular protein metabolic process	7.493062
G1/S transition of mitotic cell cycle	7.477610
signal transduction in response to DNA damage	7.471729
activation of protein kinase activity	7.444151
cytoplasmic pattern recognition receptor signaling pathway	7.442815
nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway	7.442815
protein modification by small protein conjugation or removal	7.430805
regulation of cytokine production	7.418251
regulation of cell cycle process	7.370215
cellular component assembly at cellular level	7.317513
apoptotic process	7.171247
cell cycle checkpoint	7.093102
T cell receptor signaling pathway	7.089879
interphase	7.087118
interphase of mitotic cell cycle	7.087118
programmed cell death	7.070135
G1/S transition checkpoint	6.978236
mitotic cell cycle G1/S transition checkpoint	6.978236
protein polyubiquitination	6.920139
positive regulation of sequence-specific DNA binding transcription factor activity	6.899052
regulation of mitotic cell cycle	6.898170
immune response-regulating cell surface receptor signaling pathway	6.780781
positive regulation of protein phosphorylation	6.776386
regulation of cell cycle arrest	6.761074
mRNA metabolic process	6.733292
positive regulation of apoptotic process	6.719509
positive regulation of cell death	6.719509
positive regulation of programmed cell death	6.719509
positive regulation of response to stimulus	6.686755
positive regulation of NF-kappaB transcription factor activity	6.673988
positive regulation of cell cycle process	6.671964
M/G1 transition of mitotic cell cycle	6.650164
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	6.650164
negative regulation of ligase activity	6.650164
negative regulation of ubiquitin-protein ligase activity	6.650164
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	6.650164
positive regulation of ligase activity	6.650164
positive regulation of ubiquitin-protein ligase activity	6.650164
regulation of ligase activity	6.650164
regulation of ubiquitin-protein ligase activity	6.650164
regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	6.650164
positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	6.650164
defense response	6.585578
regulation of protein serine/threonine kinase activity	6.561903
response to abiotic stimulus	6.545732
regulation of I-kappaB kinase/NF-kappaB cascade	6.510419
positive regulation of protein modification process	6.490160
positive regulation of phosphorylation	6.483929
negative regulation of molecular function	6.403635
immune response	6.403505
regulation of lipid storage	6.370068
positive regulation of phosphate metabolic process	6.352265
positive regulation of phosphorus metabolic process	6.352265
positive regulation of protein ubiquitination	6.266383
DNA damage response, signal transduction by p53 class mediator	6.258773
signal transduction by p53 class mediator	6.258773
positive regulation of immune system process	6.231110
response to decreased oxygen levels	6.201371
response to hypoxia	6.201371
MAPK cascade	6.126799
regulation of protein modification process	6.122960
positive regulation of protein kinase activity	6.115568
negative regulation of protein ubiquitination	6.112542
response to oxygen levels	5.987257
chromatin organization	5.962155
regulation of phosphate metabolic process	5.946128
regulation of phosphorus metabolic process	5.946128
S phase	5.927701
S phase of mitotic cell cycle	5.927701
nucleotide-excision repair	5.920945
antigen receptor-mediated signaling pathway	5.862387
cellular response to abiotic stimulus	5.815960
regulation of protein phosphorylation	5.805564
regulation of apoptotic process	5.794463
positive regulation of kinase activity	5.783580
defense response to bacterium	5.747527
ubiquitin-dependent protein catabolic process	5.738205
protein phosphorylation	5.708543
regulation of type I interferon production	5.657293
positive regulation of transferase activity	5.636251
regulation of transferase activity	5.624199
regulation of programmed cell death	5.614432
cell cycle process	5.580444
I-kappaB kinase/NF-kappaB cascade	5.566730
modification-dependent macromolecule catabolic process	5.493661
modification-dependent protein catabolic process	5.493661
regulation of phosphorylation	5.469633
positive regulation of I-kappaB kinase/NF-kappaB cascade	5.455326
regulation of cell death	5.450258
positive regulation of molecular function	5.423465
regulation of molecular function	5.412113
regulation of response to stimulus	5.372887
antigen processing and presentation	5.358592
negative regulation of catalytic activity	5.315824
chromosome organization	5.283288
regulation of protein ubiquitination	5.281710
regulation of protein kinase activity	5.256500
cellular protein catabolic process	5.253424
proteolysis involved in cellular protein catabolic process	5.253424
protein modification by small protein conjugation	5.231481
phosphorylation	5.180552
regulation of catalytic activity	5.138623
negative regulation of cytokine production	5.063876
protein catabolic process	5.040747
immune system process	5.011388
regulation of kinase activity	4.985373
intracellular protein kinase cascade	4.958516
regulation of immune system process	4.917938
regulation of signal transduction	4.917468
mitotic cell cycle	4.844170
positive regulation of cytokine production	4.843965
protein ubiquitination	4.775932
cellular macromolecule catabolic process	4.753424
positive regulation of response to external stimulus	4.660159
proteolysis	4.657759
anti-apoptosis	4.630335
negative regulation of type I interferon production	4.575279
regulation of cell cycle	4.573534
positive regulation of catalytic activity	4.566482
Notch receptor processing	4.563846
response to bacterium	4.512451
lymphocyte activation	4.445857
regulation of intracellular protein kinase cascade	4.410684
positive regulation of protein complex assembly	4.329996
regulation of sequence-specific DNA binding transcription factor activity	4.324534
cellular response to mechanical stimulus	4.295913
protein targeting	4.279772
macromolecule catabolic process	4.265132
proteasomal protein catabolic process	4.245360
proteasomal ubiquitin-dependent protein catabolic process	4.245360
cell cycle	4.234417
phosphate-containing compound metabolic process	4.202412
phosphorus metabolic process	4.202412
cellular protein modification process	4.160890
protein modification process	4.160890
induction of apoptosis via death domain receptors	4.159840
cellular response to ionizing radiation	4.159711
positive regulation of protein oligomerization	4.159711
regulation of protein oligomerization	4.159711
negative regulation of ERBB signaling pathway	3.998832
negative regulation of epidermal growth factor receptor signaling pathway	3.998832
nerve growth factor receptor signaling pathway	3.948435
antigen processing and presentation of exogenous antigen	3.948305
antigen processing and presentation of exogenous peptide antigen	3.948305
regulation of ERBB signaling pathway	3.928457
regulation of epidermal growth factor receptor signaling pathway	3.928457
regulation of transcription factor import into nucleus	3.919497
innate immune response	3.909178
macromolecule modification	3.769409
protein import	3.767431
positive regulation of inflammatory response	3.758270
cell cycle phase	3.704102
response to oxidative stress	3.597958
regulation of cellular response to stress	3.582015
regulation of cholesterol transport	3.582015
regulation of sterol transport	3.582015
regulation of protein import into nucleus	3.516820
regulation of protein localization to nucleus	3.516820
lymphocyte differentiation	3.478520
leukocyte activation	3.469033
negative regulation of apoptotic process	3.370731
cell cycle arrest	3.296349
regulation of nucleocytoplasmic transport	3.296349
negative regulation of programmed cell death	3.293358
regulation of protein catabolic process	3.290268
B cell differentiation	3.290125
response to gamma radiation	3.290125
response to temperature stimulus	3.290125
cellular membrane organization	3.260524
membrane organization	3.260524
negative regulation of protein metabolic process	3.220484
negative regulation of catabolic process	3.175262
negative regulation of multi-organism process	3.175101
regulation of phosphatase activity	3.175101
negative regulation of growth	3.110180
regulation of intracellular protein transport	3.110180
T cell activation	3.107855
interspecies interaction between organisms	3.093117
regulation of response to DNA damage stimulus	3.030927
cellular response to stimulus	3.029875
intracellular protein transport	3.015755
regulation of signaling	3.010996