7-methylguanosine RNA capping	9
7-methylguanosine mRNA capping	9
ATP catabolic process	2
DNA damage checkpoint	2
DNA damage response, signal transduction by p53 class mediator	2
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	2
DNA integrity checkpoint	2
DNA metabolic process	5
DNA repair	9
DNA-dependent transcription, elongation	9
DNA-dependent transcription, initiation	9
DNA-dependent transcription, termination	4
G-protein coupled receptor signaling pathway	7
G1 phase	8
G1 phase of mitotic cell cycle	8
G1/S transition checkpoint	2
G1/S transition of mitotic cell cycle	2
G2/M transition DNA damage checkpoint	8
G2/M transition checkpoint	8
G2/M transition of mitotic cell cycle	8
GPI anchor biosynthetic process	3
GPI anchor metabolic process	3
I-kappaB kinase/NF-kappaB cascade	6
JNK cascade	10
M phase	8
M phase of meiotic cell cycle	8
M phase of mitotic cell cycle	8
M/G1 transition of mitotic cell cycle	2
MAPK cascade	10
MyD88-dependent toll-like receptor signaling pathway	10
MyD88-independent toll-like receptor signaling pathway	6
NIK/NF-kappaB cascade	10
Notch receptor processing	5
Notch signaling pathway	5
RNA 3'-end processing	3
RNA biosynthetic process	6
RNA capping	9
RNA catabolic process	5
RNA export from nucleus	3
RNA localization	3
RNA metabolic process	1
RNA polyadenylation	1
RNA processing	1
RNA splicing	1
RNA splicing, via transesterification reactions	1
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	1
RNA stabilization	1
RNA transport	3
S phase	2
S phase of mitotic cell cycle	2
SRP-dependent cotranslational protein targeting to membrane	5
TRIF-dependent toll-like receptor signaling pathway	6
Toll signaling pathway	6
activation of MAPK activity	10
activation of NF-kappaB-inducing kinase activity	10
activation of cysteine-type endopeptidase activity	10
activation of cysteine-type endopeptidase activity involved in apoptotic process	10
activation of immune response	10
activation of innate immune response	10
activation of protein kinase activity	10
adaptive immune response	10
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	2
antigen processing and presentation	2
antigen processing and presentation of exogenous antigen	2
antigen processing and presentation of exogenous peptide antigen	2
antigen processing and presentation of exogenous peptide antigen via MHC class I	2
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	2
antigen processing and presentation of peptide antigen	2
antigen processing and presentation of peptide antigen via MHC class I	2
apoptotic process	2
behavioral response to nicotine	7
biosynthetic process	5
blood vessel morphogenesis	6
branched chain family amino acid catabolic process	10
branched chain family amino acid metabolic process	10
canonical Wnt receptor signaling pathway	2
carbohydrate metabolic process	7
carboxylic acid metabolic process	7
catabolic process	2
cell cycle	2
cell cycle checkpoint	2
cell cycle phase	2
cell cycle process	2
cell death	2
cell division	8
cellular amino acid metabolic process	7
cellular aromatic compound metabolic process	7
cellular biosynthetic process	5
cellular catabolic process	2
cellular component assembly	4
cellular component assembly at cellular level	1
cellular component biogenesis	4
cellular component biogenesis at cellular level	1
cellular component disassembly	5
cellular component disassembly at cellular level	5
cellular component organization	8
cellular component organization at cellular level	8
cellular component organization or biogenesis	8
cellular component organization or biogenesis at cellular level	8
cellular glucuronidation	7
cellular hormone metabolic process	7
cellular ketone metabolic process	7
cellular lipid metabolic process	7
cellular localization	5
cellular macromolecular complex assembly	1
cellular macromolecular complex disassembly	5
cellular macromolecular complex subunit organization	1
cellular macromolecule biosynthetic process	5
cellular macromolecule catabolic process	2
cellular macromolecule metabolic process	1
cellular metabolic process	1
cellular modified amino acid metabolic process	7
cellular nitrogen compound metabolic process	1
cellular process involved in reproduction	5
cellular protein catabolic process	2
cellular protein complex disassembly	5
cellular protein metabolic process	2
cellular protein modification process	2
cellular response to chemical stimulus	7
cellular response to endogenous stimulus	6
cellular response to glucagon stimulus	9
cellular response to hormone stimulus	6
cellular response to mechanical stimulus	10
cellular response to oxidative stress	5
cellular response to reactive oxygen species	5
cellular response to steroid hormone stimulus	6
cellular response to stimulus	10
cellular response to stress	2
cellular response to xenobiotic stimulus	7
chromosome segregation	2
collagen catabolic process	4
collagen metabolic process	4
connective tissue development	6
cotranslational protein targeting to membrane	5
coumarin metabolic process	7
cytoplasmic pattern recognition receptor signaling pathway	6
cytoplasmic sequestering of protein	2
cytoplasmic sequestering of transcription factor	2
death	2
defense response	10
defense response to bacterium	10
demethylation	7
detection of biotic stimulus	10
digestion	10
diterpenoid metabolic process	7
drug catabolic process	7
drug metabolic process	7
electron transport chain	5
energy derivation by oxidation of organic compounds	9
energy reserve metabolic process	9
establishment of RNA localization	3
establishment of localization in cell	5
establishment of protein localization	5
establishment of protein localization in endoplasmic reticulum	5
establishment of protein localization to organelle	5
exogenous drug catabolic process	7
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	1
extracellular matrix disassembly	4
fat-soluble vitamin metabolic process	7
flavone metabolic process	7
flavonoid glucuronidation	7
flavonoid metabolic process	7
gene expression	1
gene silencing	6
gene silencing by RNA	9
generation of precursor metabolites and energy	9
glucuronate metabolic process	7
glutathione metabolic process	7
glycerophospholipid biosynthetic process	3
heterocycle biosynthetic process	10
histone H3 acetylation	6
histone H4 acetylation	10
histone H4-K16 acetylation	10
histone mRNA metabolic process	4
hormone metabolic process	7
icosanoid metabolic process	7
immune response	10
immune response-activating signal transduction	10
immune response-regulating signaling pathway	10
immune system process	2
induction of apoptosis	5
induction of programmed cell death	5
inflammatory response	10
innate immune response	10
innate immune response-activating signal transduction	10
interphase	2
interphase of mitotic cell cycle	2
interspecies interaction between organisms	2
intracellular protein kinase cascade	10
intracellular protein transport	5
intracellular receptor mediated signaling pathway	10
intracellular signal transduction	2
intracellular transport	3
isoprenoid metabolic process	7
lipid metabolic process	7
lipopolysaccharide-mediated signaling pathway	10
lipoprotein biosynthetic process	3
mRNA 3'-end processing	3
mRNA catabolic process	5
mRNA cleavage	1
mRNA export from nucleus	3
mRNA metabolic process	1
mRNA polyadenylation	1
mRNA processing	1
mRNA splice site selection	1
mRNA stabilization	1
mRNA transport	3
macromolecular complex assembly	1
macromolecular complex disassembly	5
macromolecular complex subunit organization	4
macromolecule biosynthetic process	5
macromolecule catabolic process	2
macromolecule localization	3
macromolecule metabolic process	1
macromolecule modification	2
maintenance of location in cell	2
maintenance of protein location	2
maintenance of protein location in cell	2
mammary gland epithelial cell differentiation	6
meiosis	8
meiotic cell cycle	8
mesenchyme morphogenesis	6
metabolic process	1
microtubule cytoskeleton organization	2
microtubule-based process	2
mitosis	8
mitotic cell cycle	2
mitotic cell cycle G1/S transition DNA damage checkpoint	2
mitotic cell cycle G1/S transition checkpoint	2
mitotic cell cycle checkpoint	2
mitotic cell cycle spindle assembly checkpoint	2
mitotic cell cycle spindle checkpoint	2
mitotic metaphase/anaphase transition	8
mitotic prometaphase	8
modification-dependent macromolecule catabolic process	2
modification-dependent protein catabolic process	2
monocarboxylic acid metabolic process	7
monosaccharide metabolic process	7
monoterpenoid metabolic process	7
multicellular organismal catabolic process	4
multicellular organismal macromolecule metabolic process	4
multicellular organismal metabolic process	4
multicellular organismal signaling	7
muscle structure development	6
myeloid leukocyte activation	6
ncRNA metabolic process	5
ncRNA processing	5
negative regulation of RNA metabolic process	6
negative regulation of RNA splicing	3
negative regulation of adenylate cyclase activity	7
negative regulation of biological process	2
negative regulation of biosynthetic process	6
negative regulation of cAMP biosynthetic process	7
negative regulation of cAMP metabolic process	7
negative regulation of catalytic activity	2
negative regulation of cell cycle	8
negative regulation of cell cycle process	2
negative regulation of cellular biosynthetic process	6
negative regulation of cellular component organization	8
negative regulation of cellular macromolecule biosynthetic process	6
negative regulation of cellular metabolic process	2
negative regulation of cellular process	2
negative regulation of cellular protein metabolic process	2
negative regulation of cyclase activity	7
negative regulation of cyclic nucleotide biosynthetic process	7
negative regulation of cyclic nucleotide metabolic process	7
negative regulation of fat cell differentiation	6
negative regulation of gene expression	6
negative regulation of gene expression, epigenetic	4
negative regulation of intracellular protein transport	2
negative regulation of intracellular transport	2
negative regulation of ligase activity	2
negative regulation of lyase activity	7
negative regulation of mRNA processing	3
negative regulation of macromolecule biosynthetic process	6
negative regulation of macromolecule metabolic process	2
negative regulation of metabolic process	2
negative regulation of mitosis	2
negative regulation of mitotic metaphase/anaphase transition	2
negative regulation of molecular function	2
negative regulation of muscle cell differentiation	6
negative regulation of nitrogen compound metabolic process	6
negative regulation of nuclear division	2
negative regulation of nuclear mRNA splicing, via spliceosome	3
negative regulation of nucleobase-containing compound metabolic process	6
negative regulation of nucleocytoplasmic transport	2
negative regulation of nucleotide biosynthetic process	7
negative regulation of nucleotide metabolic process	7
negative regulation of organelle organization	2
negative regulation of protein import into nucleus	2
negative regulation of protein metabolic process	2
negative regulation of protein modification process	2
negative regulation of protein ubiquitination	2
negative regulation of purine nucleotide biosynthetic process	7
negative regulation of purine nucleotide metabolic process	7
negative regulation of transcription factor import into nucleus	2
negative regulation of transcription, DNA-dependent	6
negative regulation of transmembrane transport	2
negative regulation of ubiquitin-protein ligase activity	2
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	2
nitrogen compound metabolic process	1
nuclear division	8
nuclear export	3
nuclear mRNA splicing, via spliceosome	1
nuclear transport	3
nuclear-transcribed mRNA catabolic process	5
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	1
nuclear-transcribed mRNA catabolic process, exonucleolytic	1
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	5
nucleic acid metabolic process	1
nucleic acid phosphodiester bond hydrolysis	3
nucleic acid transport	3
nucleobase metabolic process	4
nucleobase-containing compound metabolic process	1
nucleobase-containing compound transport	3
nucleocytoplasmic transport	3
nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway	10
nucleotide-binding oligomerization domain containing signaling pathway	10
nucleotide-excision repair	9
organelle fission	8
organic acid metabolic process	7
oxidation-reduction process	7
oxidative demethylation	7
oxoacid metabolic process	7
pattern recognition receptor signaling pathway	6
peptide metabolic process	7
phenylpropanoid metabolic process	7
phosphate-containing compound metabolic process	10
phosphatidylinositol biosynthetic process	3
phospholipid biosynthetic process	3
phosphorus metabolic process	10
phosphorylation	10
pigment metabolic process	7
porphyrin-containing compound metabolic process	7
positive regulation of BMP signaling pathway	6
positive regulation of I-kappaB kinase/NF-kappaB cascade	10
positive regulation of JNK cascade	10
positive regulation of JUN kinase activity	10
positive regulation of MAP kinase activity	10
positive regulation of NF-kappaB transcription factor activity	10
positive regulation of RNA metabolic process	6
positive regulation of T cell mediated immunity	10
positive regulation of adaptive immune response	10
positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains	10
positive regulation of apoptotic process	10
positive regulation of catalytic activity	2
positive regulation of cell cycle arrest	2
positive regulation of cell cycle process	2
positive regulation of cell death	10
positive regulation of cell differentiation	6
positive regulation of cellular protein metabolic process	2
positive regulation of cytokine production	10
positive regulation of defense response	10
positive regulation of developmental process	6
positive regulation of gene expression	6
positive regulation of immune effector process	10
positive regulation of immune response	10
positive regulation of immune system process	10
positive regulation of innate immune response	10
positive regulation of interleukin-1 beta production	5
positive regulation of interleukin-2 production	10
positive regulation of interleukin-6 production	10
positive regulation of intracellular protein kinase cascade	10
positive regulation of kinase activity	10
positive regulation of ligase activity	2
positive regulation of macromolecule biosynthetic process	6
positive regulation of macromolecule metabolic process	2
positive regulation of molecular function	2
positive regulation of phosphate metabolic process	10
positive regulation of phosphorus metabolic process	10
positive regulation of phosphorylation	10
positive regulation of programmed cell death	10
positive regulation of protein kinase activity	10
positive regulation of protein metabolic process	2
positive regulation of protein modification process	2
positive regulation of protein phosphorylation	10
positive regulation of protein serine/threonine kinase activity	10
positive regulation of protein ubiquitination	2
positive regulation of reproductive process	9
positive regulation of sequence-specific DNA binding transcription factor activity	10
positive regulation of stress-activated MAPK cascade	10
positive regulation of stress-activated protein kinase signaling cascade	10
positive regulation of transcription from RNA polymerase II promoter	6
positive regulation of transcription, DNA-dependent	6
positive regulation of transferase activity	10
positive regulation of tumor necrosis factor production	10
positive regulation of ubiquitin-protein ligase activity	2
positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	2
positive regulation of viral reproduction	9
positive regulation of viral transcription	9
posttranscriptional regulation of gene expression	1
primary metabolic process	1
programmed cell death	2
proteasomal protein catabolic process	2
proteasomal ubiquitin-dependent protein catabolic process	2
proteasome assembly	2
protein K11-linked ubiquitination	8
protein catabolic process	2
protein complex disassembly	5
protein complex subunit organization	5
protein deubiquitination	2
protein lipidation	3
protein localization in endoplasmic reticulum	5
protein localization to chromosome	8
protein localization to organelle	5
protein metabolic process	2
protein modification by small protein conjugation	2
protein modification by small protein conjugation or removal	2
protein modification process	2
protein monoubiquitination	8
protein phosphorylation	10
protein polyubiquitination	2
protein targeting	5
protein targeting to ER	5
protein targeting to membrane	5
protein transport	5
protein ubiquitination	2
protein ubiquitination involved in ubiquitin-dependent protein catabolic process	8
proteolysis	2
proteolysis involved in cellular protein catabolic process	2
pyrimidine nucleobase metabolic process	4
pyrimidine-containing compound catabolic process	4
pyrimidine-containing compound metabolic process	4
rRNA metabolic process	5
rRNA processing	5
reactive oxygen species metabolic process	9
regulation of G1/S transition of mitotic cell cycle	2
regulation of I-kappaB kinase/NF-kappaB cascade	10
regulation of JNK cascade	10
regulation of JUN kinase activity	10
regulation of MAP kinase activity	10
regulation of MAPK cascade	10
regulation of RNA biosynthetic process	6
regulation of RNA metabolic process	6
regulation of RNA splicing	1
regulation of RNA stability	1
regulation of T cell mediated immunity	10
regulation of adaptive immune response	10
regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains	10
regulation of apoptotic process	2
regulation of biosynthetic process	6
regulation of catalytic activity	2
regulation of cell cycle	2
regulation of cell cycle arrest	2
regulation of cell cycle process	2
regulation of cell death	2
regulation of cellular amine metabolic process	2
regulation of cellular amino acid metabolic process	2
regulation of cellular biosynthetic process	6
regulation of cellular ketone metabolic process	2
regulation of cellular macromolecule biosynthetic process	6
regulation of cellular metabolic process	6
regulation of cellular protein metabolic process	2
regulation of cellular response to stress	10
regulation of cyclin-dependent protein kinase activity	8
regulation of cytokine production involved in immune response	10
regulation of defense response	10
regulation of erythrocyte differentiation	6
regulation of fat cell differentiation	6
regulation of gene expression	6
regulation of gene expression, epigenetic	5
regulation of hormone levels	7
regulation of immune response	10
regulation of immune system process	10
regulation of innate immune response	10
regulation of interleukin-1 beta production	5
regulation of interleukin-1 production	5
regulation of interleukin-2 production	10
regulation of interphase of mitotic cell cycle	2
regulation of intracellular protein kinase cascade	10
regulation of kinase activity	10
regulation of ligase activity	2
regulation of lymphocyte mediated immunity	10
regulation of mRNA processing	1
regulation of mRNA stability	1
regulation of macromolecule biosynthetic process	6
regulation of macromolecule metabolic process	6
regulation of metabolic process	6
regulation of mitosis	8
regulation of mitotic cell cycle	2
regulation of mitotic metaphase/anaphase transition	8
regulation of molecular function	2
regulation of muscle cell differentiation	6
regulation of nitrogen compound metabolic process	6
regulation of nuclear division	8
regulation of nuclear mRNA splicing, via spliceosome	1
regulation of nucleobase-containing compound metabolic process	6
regulation of organelle organization	2
regulation of phosphate metabolic process	10
regulation of phosphorus metabolic process	10
regulation of phosphorylation	10
regulation of primary metabolic process	6
regulation of production of molecular mediator of immune response	10
regulation of programmed cell death	2
regulation of proteasomal protein catabolic process	2
regulation of protein catabolic process	2
regulation of protein kinase activity	10
regulation of protein metabolic process	2
regulation of protein modification process	2
regulation of protein phosphorylation	10
regulation of protein ubiquitination	2
regulation of reproductive process	9
regulation of response to external stimulus	10
regulation of response to stress	10
regulation of sequence-specific DNA binding transcription factor activity	10
regulation of stress-activated MAPK cascade	10
regulation of stress-activated protein kinase signaling cascade	10
regulation of transcription from RNA polymerase II promoter	6
regulation of transcription involved in G1/S phase of mitotic cell cycle	5
regulation of transcription, DNA-dependent	6
regulation of transferase activity	10
regulation of tumor necrosis factor production	10
regulation of ubiquitin-protein ligase activity	2
regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	2
regulation of viral reproduction	9
regulation of viral transcription	9
reproduction	5
reproductive process	5
respiratory electron transport chain	5
response to DNA damage stimulus	2
response to bacterium	10
response to chemical stimulus	10
response to gamma radiation	5
response to glucagon stimulus	9
response to interleukin-1	10
response to mechanical stimulus	10
response to molecule of bacterial origin	10
response to nicotine	7
response to reactive oxygen species	5
response to xenobiotic stimulus	7
retinoic acid metabolic process	7
retinoid metabolic process	7
ribonucleoprotein complex assembly	1
ribonucleoprotein complex biogenesis	1
ribonucleoprotein complex subunit organization	1
ribosomal small subunit biogenesis	5
ribosome biogenesis	5
secondary metabolic process	7
signal transduction by p53 class mediator	2
signal transduction in response to DNA damage	2
signal transduction involved in DNA damage checkpoint	2
signal transduction involved in DNA integrity checkpoint	2
signal transduction involved in G1/S transition checkpoint	2
signal transduction involved in cell cycle checkpoint	2
signal transduction involved in mitotic cell cycle G1/S checkpoint	2
signal transduction involved in mitotic cell cycle G1/S transition DNA damage checkpoint	2
signal transduction involved in mitotic cell cycle checkpoint	2
small molecule metabolic process	7
snRNA metabolic process	5
snRNA processing	5
spindle assembly checkpoint	2
spindle checkpoint	2
spindle organization	2
spliceosomal complex assembly	1
spliceosomal snRNP assembly	4
steroid catabolic process	7
steroid metabolic process	7
stress-activated MAPK cascade	6
stress-activated protein kinase signaling cascade	6
sulfur compound metabolic process	7
synaptic transmission	7
synaptic transmission, cholinergic	7
termination of RNA polymerase II transcription	4
terpenoid metabolic process	7
toll-like receptor 1 signaling pathway	10
toll-like receptor 2 signaling pathway	10
toll-like receptor 3 signaling pathway	6
toll-like receptor 4 signaling pathway	6
toll-like receptor signaling pathway	6
transcription elongation from RNA polymerase II promoter	9
transcription from RNA polymerase II promoter	3
transcription from RNA polymerase III promoter	5
transcription initiation from RNA polymerase II promoter	9
transcription, DNA-dependent	6
transcription-coupled nucleotide-excision repair	9
translation	5
translational elongation	5
translational initiation	5
translational termination	5
transmission of nerve impulse	7
ubiquitin-dependent protein catabolic process	2
unsaturated fatty acid metabolic process	7
uronic acid metabolic process	7
viral genome expression	5
viral infectious cycle	5
viral reproduction	2
viral reproductive process	5
viral transcription	5
vitamin A metabolic process	7
vitamin metabolic process	7
xenobiotic glucuronidation	7
xenobiotic metabolic process	7