'de novo' posttranslational protein folding	3
'de novo' protein folding	3
B cell mediated immunity	9
CDP-diacylglycerol biosynthetic process	6
CDP-diacylglycerol metabolic process	6
DNA catabolic process	6
DNA catabolic process, endonucleolytic	6
DNA conformation change	2
DNA metabolic process	2
DNA packaging	2
DNA recombination	2
DNA repair	7
DNA-dependent transcription, initiation	5
G-protein coupled receptor signaling pathway	7
G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger	6
M phase	2
M phase of meiotic cell cycle	2
M phase of mitotic cell cycle	2
O-glycan processing	9
RNA biosynthetic process	8
RNA metabolic process	8
RNA processing	6
RNA splicing	7
RNA splicing, via transesterification reactions	6
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	6
S phase	6
S phase of mitotic cell cycle	6
T cell activation	3
T cell costimulation	6
T cell differentiation	3
T cell receptor signaling pathway	3
activation of MAPKK activity	6
activation of immune response	3
activation of phospholipase C activity	6
activation of protein kinase activity	6
acylglycerol metabolic process	6
adaptive immune response	3
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains	3
adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway	7
adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6
alcohol metabolic process	9
amine metabolic process	9
amino acid activation	6
aminoglycan metabolic process	6
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	7
anatomical structure development	5
anatomical structure formation involved in morphogenesis	3
anatomical structure morphogenesis	5
anterior/posterior pattern specification	5
antigen processing and presentation	10
antigen processing and presentation of exogenous antigen	10
antigen processing and presentation of exogenous peptide antigen	10
antigen processing and presentation of exogenous peptide antigen via MHC class I	10
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	10
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent	6
antigen processing and presentation of peptide antigen	10
antigen processing and presentation of peptide antigen via MHC class I	10
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	3
antigen receptor-mediated signaling pathway	3
apoptotic DNA fragmentation	6
apoptotic nuclear change	6
appendage development	3
appendage morphogenesis	3
artery development	3
biological regulation	5
biosynthetic process	5
blood vessel development	3
blood vessel morphogenesis	3
brain development	3
branching morphogenesis of a tube	3
calcium ion homeostasis	6
calcium ion transport	6
camera-type eye development	3
carbohydrate catabolic process	6
carbohydrate derivative biosynthetic process	9
carbohydrate derivative metabolic process	9
carbohydrate homeostasis	3
carbohydrate metabolic process	9
carboxylic acid biosynthetic process	6
cardiovascular system development	3
cation transport	6
cell activation	3
cell communication	7
cell cycle	7
cell cycle phase	2
cell cycle process	2
cell development	3
cell differentiation	5
cell differentiation in spinal cord	3
cell division	6
cell fate commitment	5
cell fate determination	3
cell fate specification	3
cell migration	3
cell surface receptor signaling pathway	1
cell-cell signaling	7
cellular amine metabolic process	9
cellular biogenic amine metabolic process	9
cellular biosynthetic process	5
cellular calcium ion homeostasis	6
cellular carbohydrate metabolic process	9
cellular catabolic process	7
cellular component assembly	7
cellular component assembly at cellular level	7
cellular component biogenesis	7
cellular component disassembly involved in apoptotic process	6
cellular component movement	6
cellular component organization	7
cellular component organization at cellular level	7
cellular component organization or biogenesis	7
cellular component organization or biogenesis at cellular level	7
cellular defense response	6
cellular developmental process	5
cellular divalent inorganic cation homeostasis	6
cellular ketone metabolic process	6
cellular lipid catabolic process	6
cellular lipid metabolic process	6
cellular localization	7
cellular macromolecular complex assembly	7
cellular macromolecular complex subunit organization	7
cellular macromolecule biosynthetic process	4
cellular macromolecule catabolic process	7
cellular macromolecule localization	7
cellular macromolecule metabolic process	5
cellular metabolic process	3
cellular nitrogen compound metabolic process	5
cellular process	7
cellular process involved in reproduction	2
cellular protein catabolic process	6
cellular protein complex assembly	6
cellular protein localization	7
cellular protein metabolic process	7
cellular protein modification process	7
cellular response to UV	6
cellular response to abiotic stimulus	3
cellular response to biotic stimulus	6
cellular response to chemical stimulus	5
cellular response to cytokine stimulus	1
cellular response to endogenous stimulus	3
cellular response to fibroblast growth factor stimulus	6
cellular response to growth factor stimulus	3
cellular response to interferon-gamma	1
cellular response to interleukin-1	3
cellular response to light stimulus	6
cellular response to lipopolysaccharide	6
cellular response to organic substance	1
cellular response to stimulus	7
cellular response to stress	6
cellular response to type I interferon	10
central nervous system development	5
central nervous system neuron differentiation	3
chaperone-mediated protein folding	6
chordate embryonic development	3
chromatin assembly	2
chromatin assembly or disassembly	2
chromatin modification	7
chromatin organization	2
chromatin silencing	6
chromosome condensation	7
chromosome localization	7
chromosome organization	2
chromosome organization involved in meiosis	6
chromosome segregation	2
ciliary or flagellar motility	6
circulatory system development	3
coenzyme metabolic process	6
cofactor metabolic process	6
complement activation	9
complement activation, classical pathway	9
covalent chromatin modification	7
cytokine-mediated signaling pathway	1
cytosolic calcium ion homeostasis	6
defense response	10
defense response to virus	6
detection of abiotic stimulus	6
detection of external stimulus	7
detection of light stimulus	6
detection of stimulus	6
developmental process	5
diacylglycerol biosynthetic process	6
diacylglycerol metabolic process	6
ear development	3
ear morphogenesis	3
elevation of cytosolic calcium ion concentration	7
embryo development	5
embryo development ending in birth or egg hatching	3
embryonic morphogenesis	5
embryonic organ development	3
embryonic organ morphogenesis	3
embryonic placenta development	3
embryonic skeletal system development	3
endocrine system development	3
endocytosis	6
energy derivation by oxidation of organic compounds	6
energy reserve metabolic process	6
epithelial cell differentiation	3
epithelial tube morphogenesis	3
epithelium development	5
erythrocyte differentiation	3
erythrocyte homeostasis	3
establishment of chromosome localization	7
establishment of localization	7
establishment of localization in cell	7
establishment of organelle localization	7
establishment of protein localization	7
establishment of protein localization in mitochondrion	7
establishment of protein localization to organelle	7
ethanolamine-containing compound metabolic process	9
exocytosis	7
eye development	3
eye morphogenesis	3
fertilization	6
fibroblast growth factor receptor signaling pathway	6
forebrain development	3
formation of primary germ layer	3
gamete generation	6
gastrulation	3
gene expression	4
generation of a signal involved in cell-cell signaling	7
generation of neurons	3
generation of precursor metabolites and energy	6
gland development	3
gland morphogenesis	3
glucose homeostasis	3
glutamate secretion	7
glycerolipid biosynthetic process	6
glycerolipid metabolic process	9
glycerophospholipid biosynthetic process	6
glycerophospholipid metabolic process	9
glycolipid metabolic process	6
glycoprotein biosynthetic process	9
glycoprotein metabolic process	9
glycosaminoglycan catabolic process	6
glycosaminoglycan metabolic process	6
glycosphingolipid metabolic process	6
glycosylation	9
heart development	3
heart morphogenesis	3
hemopoiesis	5
hemopoietic or lymphoid organ development	5
hepaticobiliary system development	3
heterocycle metabolic process	6
hindbrain development	3
histone modification	6
humoral immune response	3
humoral immune response mediated by circulating immunoglobulin	9
hyaluronan catabolic process	6
hyaluronan metabolic process	6
immune effector process	3
immune response	1
immune response-activating cell surface receptor signaling pathway	3
immune response-activating signal transduction	3
immune response-inhibiting cell surface receptor signaling pathway	7
immune response-inhibiting signal transduction	7
immune response-regulating cell surface receptor signaling pathway	7
immune response-regulating signaling pathway	3
immune system development	5
immune system process	1
immunoglobulin mediated immune response	9
in utero embryonic development	3
innate immune response	1
inner ear development	3
inner ear morphogenesis	3
interferon-gamma-mediated signaling pathway	1
interspecies interaction between organisms	7
intracellular protein transport	7
intracellular receptor mediated signaling pathway	3
intracellular transport	7
ion transport	6
iron ion homeostasis	6
learning	3
leukocyte activation	3
leukocyte differentiation	3
limb development	3
limb morphogenesis	3
lipid biosynthetic process	9
lipid catabolic process	6
lipid metabolic process	6
liver development	3
localization	6
lung development	3
lymphocyte activation	3
lymphocyte costimulation	6
lymphocyte differentiation	3
lymphocyte mediated immunity	3
mRNA metabolic process	7
mRNA processing	6
macromolecular complex assembly	7
macromolecular complex subunit organization	7
macromolecule biosynthetic process	4
macromolecule catabolic process	7
macromolecule glycosylation	9
macromolecule localization	7
macromolecule metabolic process	5
macromolecule methylation	6
macromolecule modification	7
male gamete generation	6
male meiosis	2
mammary gland development	3
mammary gland epithelium development	3
mammary gland morphogenesis	3
meiosis	2
meiosis I	2
meiotic cell cycle	2
meiotic chromosome segregation	6
membrane depolarization	6
membrane docking	6
membrane lipid metabolic process	6
mesoderm development	3
mesoderm formation	3
mesoderm morphogenesis	3
metabolic process	3
metal ion transport	6
metaphase plate congression	7
methylation	6
microtubule cytoskeleton organization	6
microtubule-based movement	6
microtubule-based process	6
midbrain development	3
mismatch repair	6
mitochondrial transport	7
mitochondrion organization	7
mitosis	2
mitotic cell cycle	7
mitotic metaphase/anaphase transition	7
mitotic prometaphase	2
mitotic sister chromatid segregation	6
mitotic spindle organization	6
modification-dependent macromolecule catabolic process	7
modification-dependent protein catabolic process	7
morphogenesis of a branching epithelium	3
morphogenesis of a branching structure	3
morphogenesis of an epithelium	3
multi-organism process	7
multicellular organismal development	5
multicellular organismal process	5
multicellular organismal signaling	7
muscle organ development	3
muscle structure development	3
myeloid cell differentiation	3
myeloid leukocyte differentiation	3
negative regulation of RNA metabolic process	3
negative regulation of Ras protein signal transduction	3
negative regulation of apoptotic process	3
negative regulation of biological process	3
negative regulation of biosynthetic process	3
negative regulation of calcium ion transport	6
negative regulation of catalytic activity	3
negative regulation of cell death	3
negative regulation of cell differentiation	3
negative regulation of cell proliferation	3
negative regulation of cellular biosynthetic process	3
negative regulation of cellular macromolecule biosynthetic process	3
negative regulation of cellular metabolic process	3
negative regulation of cellular process	3
negative regulation of developmental process	3
negative regulation of gene expression	3
negative regulation of hydrolase activity	3
negative regulation of intracellular protein kinase cascade	3
negative regulation of macromolecule biosynthetic process	3
negative regulation of macromolecule metabolic process	3
negative regulation of metabolic process	3
negative regulation of molecular function	3
negative regulation of nitrogen compound metabolic process	3
negative regulation of nucleobase-containing compound metabolic process	3
negative regulation of programmed cell death	3
negative regulation of reproductive process	6
negative regulation of response to stimulus	3
negative regulation of signal transduction	3
negative regulation of signaling	3
negative regulation of small GTPase mediated signal transduction	3
negative regulation of transcription from RNA polymerase II promoter	5
negative regulation of transcription, DNA-dependent	3
negative regulation of transposition	6
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	6
negative regulation of viral genome replication	6
negative regulation of viral reproduction	6
nervous system development	3
neurogenesis	3
neurological system process	7
neuron development	3
neuron differentiation	3
neuron fate commitment	3
neuron fate specification	3
neurotransmitter secretion	7
neurotransmitter transport	7
neutral lipid metabolic process	6
nitrogen compound metabolic process	5
nuclear division	2
nuclear mRNA splicing, via spliceosome	6
nucleic acid metabolic process	4
nucleic acid phosphodiester bond hydrolysis	6
nucleobase-containing compound metabolic process	5
nucleobase-containing small molecule metabolic process	6
nucleosome assembly	2
nucleosome organization	2
organ development	4
organ morphogenesis	5
organelle fission	2
organelle localization	7
organelle organization	2
organic acid biosynthetic process	6
organic substance metabolic process	9
organophosphate metabolic process	6
oxidation-reduction process	6
pancreas development	3
pattern specification process	5
patterning of blood vessels	3
phosphate-containing compound metabolic process	6
phosphatidylcholine metabolic process	9
phospholipid biosynthetic process	6
phospholipid metabolic process	6
phosphorus metabolic process	6
phosphorylation	6
phototransduction	6
placenta development	3
positive regulation of DNA binding	3
positive regulation of I-kappaB kinase/NF-kappaB cascade	3
positive regulation of NF-kappaB transcription factor activity	6
positive regulation of RNA metabolic process	8
positive regulation of T cell activation	3
positive regulation of biological process	4
positive regulation of biosynthetic process	4
positive regulation of catalytic activity	6
positive regulation of cell activation	3
positive regulation of cell differentiation	5
positive regulation of cell proliferation	3
positive regulation of cellular biosynthetic process	4
positive regulation of cellular metabolic process	4
positive regulation of cellular process	4
positive regulation of cellular protein metabolic process	7
positive regulation of cytokine biosynthetic process	3
positive regulation of cytokine production	3
positive regulation of developmental process	5
positive regulation of gene expression	8
positive regulation of immune response	3
positive regulation of immune system process	3
positive regulation of intracellular protein kinase cascade	6
positive regulation of kinase activity	6
positive regulation of ligase activity	7
positive regulation of macromolecule biosynthetic process	8
positive regulation of macromolecule metabolic process	4
positive regulation of mesenchymal cell proliferation	3
positive regulation of metabolic process	4
positive regulation of molecular function	6
positive regulation of multicellular organismal process	3
positive regulation of nitrogen compound metabolic process	4
positive regulation of nucleobase-containing compound metabolic process	4
positive regulation of phosphate metabolic process	6
positive regulation of phospholipase C activity	6
positive regulation of phosphorus metabolic process	6
positive regulation of phosphorylation	6
positive regulation of protein kinase activity	6
positive regulation of protein metabolic process	6
positive regulation of protein modification process	7
positive regulation of protein phosphorylation	6
positive regulation of protein ubiquitination	6
positive regulation of response to stimulus	3
positive regulation of sequence-specific DNA binding transcription factor activity	3
positive regulation of transcription from RNA polymerase II promoter	8
positive regulation of transcription, DNA-dependent	8
positive regulation of transferase activity	6
positive regulation of type I interferon production	3
positive regulation of ubiquitin-protein ligase activity	7
positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	7
post-translational protein modification	9
primary metabolic process	3
programmed cell death	6
prophase	6
prostate gland development	3
prostate gland epithelium morphogenesis	3
prostate gland morphogenesis	3
proteasomal protein catabolic process	7
proteasomal ubiquitin-dependent protein catabolic process	7
protein O-linked glycosylation	9
protein activation cascade	9
protein catabolic process	6
protein complex subunit organization	6
protein folding	5
protein glycosylation	9
protein import	7
protein localization	7
protein localization in mitochondrion	7
protein localization to chromosome	7
protein localization to organelle	7
protein metabolic process	7
protein modification by small protein conjugation or removal	6
protein modification process	7
protein polyubiquitination	6
protein targeting	7
protein targeting to mitochondrion	7
protein transport	7
protein-DNA complex assembly	2
protein-DNA complex subunit organization	2
protein-chromophore linkage	6
proteolysis involved in cellular protein catabolic process	7
purine nucleotide biosynthetic process	6
purine-containing compound biosynthetic process	6
reciprocal DNA recombination	2
reciprocal meiotic recombination	2
regionalization	5
regulation of DNA binding	3
regulation of I-kappaB kinase/NF-kappaB cascade	3
regulation of RNA biosynthetic process	8
regulation of RNA metabolic process	8
regulation of T cell activation	3
regulation of T cell differentiation	3
regulation of T cell mediated cytotoxicity	6
regulation of T cell tolerance induction	6
regulation of acute inflammatory response	9
regulation of anatomical structure morphogenesis	3
regulation of apoptotic process	3
regulation of biological process	5
regulation of biosynthetic process	4
regulation of calcium ion transport	6
regulation of calcium ion transport via voltage-gated calcium channel activity	6
regulation of cell death	3
regulation of cell development	3
regulation of cell differentiation	5
regulation of cell proliferation	5
regulation of cellular biosynthetic process	4
regulation of cellular localization	6
regulation of cellular macromolecule biosynthetic process	8
regulation of cellular metabolic process	4
regulation of cellular process	5
regulation of cellular protein metabolic process	6
regulation of complement activation	9
regulation of cytokine biosynthetic process	3
regulation of cytokine production	3
regulation of cytokine-mediated signaling pathway	3
regulation of defense response	3
regulation of defense response to virus	6
regulation of defense response to virus by host	6
regulation of developmental process	5
regulation of endocytosis	6
regulation of epithelial cell differentiation	3
regulation of epithelial cell proliferation	3
regulation of epithelial to mesenchymal transition	3
regulation of erythrocyte differentiation	3
regulation of exocytosis	6
regulation of gene expression	8
regulation of gene expression, epigenetic	6
regulation of hormone secretion	6
regulation of humoral immune response	9
regulation of immune effector process	6
regulation of immune response	1
regulation of immune system process	5
regulation of innate immune response	3
regulation of intracellular protein kinase cascade	6
regulation of ion transmembrane transport	6
regulation of ion transmembrane transporter activity	6
regulation of ligase activity	6
regulation of localization	6
regulation of macromolecule biosynthetic process	8
regulation of macromolecule metabolic process	4
regulation of mesenchymal cell proliferation	3
regulation of metabolic process	4
regulation of molecular function	3
regulation of multi-organism process	6
regulation of multicellular organismal development	5
regulation of multicellular organismal process	5
regulation of myeloid cell differentiation	3
regulation of myeloid leukocyte differentiation	3
regulation of neurogenesis	3
regulation of neurotransmitter levels	7
regulation of nitrogen compound metabolic process	8
regulation of nucleobase-containing compound metabolic process	8
regulation of organ morphogenesis	3
regulation of peptide hormone secretion	6
regulation of peptide secretion	6
regulation of peptide transport	6
regulation of phospholipase C activity	6
regulation of primary metabolic process	8
regulation of programmed cell death	3
regulation of protein activation cascade	9
regulation of protein kinase activity	6
regulation of protein modification process	6
regulation of protein processing	6
regulation of protein ubiquitination	6
regulation of response to biotic stimulus	6
regulation of response to cytokine stimulus	3
regulation of response to stimulus	3
regulation of response to stress	3
regulation of secretion	6
regulation of sequence-specific DNA binding transcription factor activity	3
regulation of signal transduction	3
regulation of steroid biosynthetic process	3
regulation of steroid metabolic process	3
regulation of tolerance induction	6
regulation of transcription from RNA polymerase II promoter	8
regulation of transcription regulatory region DNA binding	3
regulation of transcription, DNA-dependent	8
regulation of transmembrane transport	6
regulation of transmembrane transporter activity	6
regulation of transporter activity	6
regulation of transposition	6
regulation of type I interferon production	3
regulation of ubiquitin-protein ligase activity	6
regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	7
regulation of vesicle-mediated transport	6
regulation of viral genome replication	6
respiratory system development	3
respiratory tube development	3
response to DNA damage stimulus	7
response to abiotic stimulus	3
response to biotic stimulus	7
response to chemical stimulus	5
response to cytokine stimulus	1
response to endogenous stimulus	3
response to estrogen stimulus	3
response to external stimulus	3
response to fibroblast growth factor stimulus	6
response to growth factor stimulus	3
response to hormone stimulus	3
response to interferon-gamma	1
response to interleukin-1	3
response to lipopolysaccharide	3
response to molecule of bacterial origin	3
response to organic substance	5
response to other organism	7
response to steroid hormone stimulus	3
response to stimulus	7
response to stress	7
response to topologically incorrect protein	6
response to tumor necrosis factor	3
response to type I interferon	10
response to unfolded protein	6
response to virus	10
secretion	7
secretion by cell	7
segmentation	3
semaphorin-plexin signaling pathway	7
sensory organ development	3
sensory perception	6
sexual reproduction	6
signal release	7
signal transduction	1
signaling	7
sister chromatid cohesion	7
sister chromatid segregation	6
skeletal muscle organ development	6
skeletal muscle tissue development	6
skeletal system development	3
skeletal system morphogenesis	3
small GTPase mediated signal transduction	6
small molecule biosynthetic process	6
small molecule metabolic process	6
somite development	3
somitogenesis	3
spermatogenesis	6
sphingolipid metabolic process	6
spinal cord development	3
synapsis	6
synaptic transmission	7
synaptic vesicle exocytosis	7
synaptic vesicle transport	7
system development	5
tRNA aminoacylation	6
tRNA aminoacylation for protein translation	6
tissue development	5
tissue morphogenesis	5
transcription from RNA polymerase II promoter	4
transcription initiation from RNA polymerase II promoter	5
transcription, DNA-dependent	8
transforming growth factor beta receptor signaling pathway	3
translation	9
transmembrane receptor protein serine/threonine kinase signaling pathway	3
transmembrane receptor protein tyrosine kinase signaling pathway	6
transmission of nerve impulse	7
transport	6
triglyceride biosynthetic process	6
triglyceride metabolic process	6
tube development	3
tube morphogenesis	3
type I interferon-mediated signaling pathway	10
ubiquitin-dependent protein catabolic process	7
urogenital system development	3
vasculature development	3
ventral spinal cord development	3
vesicle-mediated transport	6
viral reproduction	6