ATP catabolic process	2
ATP hydrolysis coupled proton transport	8
ATP metabolic process	2
B cell mediated immunity	3
BMP signaling pathway	10
DNA alkylation	2
DNA damage checkpoint	4
DNA damage response, signal transduction by p53 class mediator	4
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	7
DNA integrity checkpoint	4
DNA metabolic process	2
DNA methylation	2
DNA modification	2
DNA repair	2
DNA replication	2
DNA-dependent transcription, initiation	2
G1/S transition checkpoint	7
G1/S transition of mitotic cell cycle	4
G2/M transition of mitotic cell cycle	2
M phase	2
M phase of meiotic cell cycle	2
M phase of mitotic cell cycle	2
M/G1 transition of mitotic cell cycle	7
RNA biosynthetic process	2
RNA catabolic process	2
RNA export from nucleus	6
RNA localization	9
RNA metabolic process	10
RNA modification	2
RNA processing	5
RNA splicing	5
RNA splicing, via transesterification reactions	2
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	2
RNA transport	9
S phase	7
S phase of mitotic cell cycle	7
T cell activation	2
T cell costimulation	1
T cell differentiation	2
T cell differentiation in thymus	2
T cell proliferation	2
T cell receptor signaling pathway	1
T cell selection	2
activation of immune response	1
acylglycerol metabolic process	2
adaptive immune response	3
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains	3
aging	2
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	7
anatomical structure development	2
anion transport	2
anterior/posterior pattern specification	2
antigen processing and presentation	1
antigen processing and presentation of exogenous antigen	4
antigen processing and presentation of exogenous peptide antigen	4
antigen processing and presentation of exogenous peptide antigen via MHC class I	4
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	4
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent	2
antigen processing and presentation of exogenous peptide antigen via MHC class II	1
antigen processing and presentation of peptide antigen	1
antigen processing and presentation of peptide antigen via MHC class I	10
antigen processing and presentation of peptide antigen via MHC class II	1
antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	1
antigen receptor-mediated signaling pathway	1
apoptotic process	10
biological regulation	10
blood vessel development	2
blood vessel morphogenesis	2
branching involved in mammary gland duct morphogenesis	2
carbohydrate derivative catabolic process	2
carbohydrate metabolic process	6
carbohydrate transport	6
cardiovascular system development	2
catabolic process	4
cation homeostasis	8
cation transport	8
cell activation	2
cell aging	2
cell communication	10
cell cycle	2
cell cycle checkpoint	4
cell cycle phase	2
cell cycle process	2
cell death	10
cell differentiation	2
cell killing	2
cell migration	2
cell motility	2
cell proliferation	10
cell surface receptor signaling pathway	1
cellular catabolic process	4
cellular cation homeostasis	8
cellular chemical homeostasis	2
cellular component assembly at cellular level	2
cellular component disassembly	2
cellular component disassembly at cellular level	2
cellular component organization	2
cellular component organization at cellular level	2
cellular component organization or biogenesis	2
cellular component organization or biogenesis at cellular level	2
cellular developmental process	2
cellular homeostasis	2
cellular ion homeostasis	2
cellular iron ion homeostasis	8
cellular lipid metabolic process	2
cellular localization	2
cellular macromolecule biosynthetic process	2
cellular macromolecule catabolic process	4
cellular macromolecule localization	2
cellular macromolecule metabolic process	10
cellular metabolic process	2
cellular metal ion homeostasis	8
cellular nitrogen compound catabolic process	2
cellular nitrogen compound metabolic process	10
cellular process involved in reproduction	2
cellular protein catabolic process	4
cellular protein localization	2
cellular protein metabolic process	4
cellular protein modification process	4
cellular response to abiotic stimulus	2
cellular response to chemical stimulus	1
cellular response to cytokine stimulus	1
cellular response to decreased oxygen levels	2
cellular response to external stimulus	10
cellular response to extracellular stimulus	2
cellular response to hormone stimulus	2
cellular response to hypoxia	2
cellular response to insulin stimulus	8
cellular response to interferon-gamma	1
cellular response to nutrient levels	2
cellular response to organic substance	1
cellular response to oxygen levels	2
cellular response to peptide hormone stimulus	2
cellular response to radiation	2
cellular response to steroid hormone stimulus	2
cellular response to stimulus	10
cellular response to stress	10
cellular response to tumor necrosis factor	2
cellular response to type I interferon	1
centriole replication	2
centrosome cycle	2
centrosome duplication	2
centrosome organization	2
chemical homeostasis	2
chordate embryonic development	2
chromosome organization	2
chromosome organization involved in meiosis	2
cilium assembly	2
cilium morphogenesis	2
circulatory system development	2
complement activation	3
complement activation, classical pathway	3
cytokine-mediated signaling pathway	1
cytoskeleton organization	2
death	10
defense response	1
defense response to bacterium	2
defense response to virus	2
developmental process	2
diacylglycerol metabolic process	2
embryo development ending in birth or egg hatching	2
embryonic digit morphogenesis	2
embryonic forelimb morphogenesis	2
endocytosis	2
energy coupled proton transport, against electrochemical gradient	8
enzyme linked receptor protein signaling pathway	2
epithelial cell maturation	2
establishment of RNA localization	9
establishment of localization	5
establishment of localization in cell	6
establishment of protein localization	2
establishment of protein localization to organelle	2
ferric iron transport	8
forelimb morphogenesis	2
gene expression	10
gland development	10
gland morphogenesis	2
glucose transport	6
glycerolipid metabolic process	2
heart development	2
heart morphogenesis	2
hemopoiesis	2
hemopoietic or lymphoid organ development	2
heterocycle catabolic process	2
heterocycle metabolic process	2
hexose transport	6
hindlimb morphogenesis	2
humoral immune response	3
humoral immune response mediated by circulating immunoglobulin	3
hydrogen transport	8
immune effector process	3
immune response	1
immune response-activating cell surface receptor signaling pathway	1
immune response-activating signal transduction	1
immune response-regulating cell surface receptor signaling pathway	1
immune response-regulating signaling pathway	1
immune system development	2
immune system process	1
immunoglobulin mediated immune response	3
in utero embryonic development	2
induction of apoptosis	2
induction of apoptosis by extracellular signals	2
induction of programmed cell death	2
innate immune response	1
insulin receptor signaling pathway	8
interaction with host	2
interferon-gamma-mediated signaling pathway	1
interphase	2
interphase of mitotic cell cycle	2
interspecies interaction between organisms	2
intracellular protein kinase cascade	2
intracellular protein transport	2
intracellular receptor mediated signaling pathway	2
intracellular signal transduction	10
intracellular transport	6
intronless viral mRNA export from host nucleus	6
ion homeostasis	2
ion transmembrane transport	8
ion transport	8
iron ion homeostasis	8
iron ion transport	8
leukocyte activation	2
leukocyte differentiation	2
leukocyte mediated cytotoxicity	2
leukocyte mediated immunity	3
leukocyte proliferation	2
lipid metabolic process	2
localization	5
localization of cell	2
lymph node development	2
lymphocyte activation	2
lymphocyte costimulation	1
lymphocyte differentiation	2
lymphocyte mediated immunity	3
lymphocyte proliferation	2
mRNA catabolic process	2
mRNA export from nucleus	6
mRNA metabolic process	4
mRNA processing	5
mRNA transport	9
macromolecule biosynthetic process	2
macromolecule catabolic process	4
macromolecule localization	5
macromolecule metabolic process	2
macromolecule methylation	2
macromolecule modification	4
male gonad development	2
mammary gland development	2
mammary gland duct morphogenesis	2
mammary gland morphogenesis	2
meiosis	2
meiosis I	2
metal ion homeostasis	8
metal ion transport	8
methylation	2
microtubule cytoskeleton organization	2
microtubule organizing center organization	2
microtubule-based process	2
mitosis	2
mitotic cell cycle	2
mitotic cell cycle G1/S transition DNA damage checkpoint	7
mitotic cell cycle G1/S transition checkpoint	7
mitotic cell cycle checkpoint	4
modification-dependent macromolecule catabolic process	4
modification-dependent protein catabolic process	4
mononuclear cell proliferation	2
monosaccharide transport	6
monovalent inorganic cation homeostasis	2
monovalent inorganic cation transport	8
multi-organism process	10
multicellular organism growth	2
multicellular organismal development	2
multicellular organismal process	2
myeloid cell differentiation	2
myeloid leukocyte differentiation	2
ncRNA metabolic process	2
negative regulation of DNA binding	2
negative regulation of T cell activation	2
negative regulation of binding	10
negative regulation of biological process	2
negative regulation of catalytic activity	10
negative regulation of cell proliferation	2
negative regulation of cellular metabolic process	2
negative regulation of cellular protein metabolic process	4
negative regulation of ligase activity	7
negative regulation of lymphocyte activation	2
negative regulation of macromolecule metabolic process	2
negative regulation of metabolic process	2
negative regulation of molecular function	10
negative regulation of protein binding	2
negative regulation of protein metabolic process	2
negative regulation of protein modification process	10
negative regulation of protein ubiquitination	7
negative regulation of reproductive process	2
negative regulation of transposition	2
negative regulation of ubiquitin-protein ligase activity	7
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	7
negative regulation of viral genome replication	2
negative regulation of viral reproduction	2
neuron migration	2
neutral lipid metabolic process	2
nitrogen compound metabolic process	10
nuclear division	2
nuclear export	6
nuclear mRNA splicing, via spliceosome	2
nuclear transport	6
nuclear-transcribed mRNA catabolic process	2
nucleic acid metabolic process	10
nucleic acid transport	9
nucleobase-containing compound catabolic process	2
nucleobase-containing compound metabolic process	10
nucleobase-containing compound transport	9
nucleocytoplasmic transport	6
nucleoside catabolic process	2
nucleoside metabolic process	2
nucleoside triphosphate catabolic process	2
nucleotide catabolic process	2
organ development	2
organelle organization	2
organic substance metabolic process	2
organic substance transport	6
ossification	2
osteoclast differentiation	2
peptidyl-amino acid modification	2
placenta development	2
positive T cell selection	2
positive regulation of B cell proliferation	2
positive regulation of I-kappaB kinase/NF-kappaB cascade	2
positive regulation of NF-kappaB transcription factor activity	2
positive regulation of RNA metabolic process	10
positive regulation of T cell activation	1
positive regulation of T cell differentiation	2
positive regulation of acute inflammatory response	2
positive regulation of adaptive immune response	2
positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains	2
positive regulation of apoptotic process	10
positive regulation of apoptotic signaling pathway	2
positive regulation of biological process	10
positive regulation of biosynthetic process	10
positive regulation of catalytic activity	10
positive regulation of cell activation	1
positive regulation of cell communication	2
positive regulation of cell cycle arrest	7
positive regulation of cell cycle process	7
positive regulation of cell death	10
positive regulation of cell development	2
positive regulation of cell differentiation	2
positive regulation of cell killing	2
positive regulation of cellular biosynthetic process	10
positive regulation of cellular metabolic process	10
positive regulation of cellular process	10
positive regulation of cellular protein metabolic process	10
positive regulation of cysteine-type endopeptidase activity	2
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	2
positive regulation of cytokine biosynthetic process	2
positive regulation of developmental process	2
positive regulation of endopeptidase activity	2
positive regulation of gene expression	10
positive regulation of immune response	1
positive regulation of immune system process	1
positive regulation of intracellular protein transport	2
positive regulation of intracellular transport	2
positive regulation of kinase activity	2
positive regulation of leukocyte activation	1
positive regulation of leukocyte mediated cytotoxicity	2
positive regulation of leukocyte mediated immunity	2
positive regulation of ligase activity	7
positive regulation of lymphocyte activation	1
positive regulation of lymphocyte mediated immunity	2
positive regulation of macromolecule biosynthetic process	10
positive regulation of macromolecule metabolic process	10
positive regulation of metabolic process	10
positive regulation of molecular function	10
positive regulation of multicellular organismal process	2
positive regulation of myeloid leukocyte differentiation	2
positive regulation of nitric oxide biosynthetic process	2
positive regulation of nitrogen compound metabolic process	10
positive regulation of nucleobase-containing compound metabolic process	2
positive regulation of peptidase activity	2
positive regulation of programmed cell death	10
positive regulation of protein catabolic process	2
positive regulation of protein import into nucleus	2
positive regulation of protein kinase activity	2
positive regulation of protein metabolic process	10
positive regulation of protein modification process	10
positive regulation of protein serine/threonine kinase activity	2
positive regulation of protein ubiquitination	4
positive regulation of response to stimulus	2
positive regulation of sequence-specific DNA binding transcription factor activity	2
positive regulation of signal transduction	2
positive regulation of signaling	2
positive regulation of transcription from RNA polymerase II promoter	2
positive regulation of transcription, DNA-dependent	2
positive regulation of transferase activity	2
positive regulation of ubiquitin-protein ligase activity	7
positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	7
positive thymic T cell selection	2
programmed cell death	10
prophase	2
proteasomal protein catabolic process	4
proteasomal ubiquitin-dependent protein catabolic process	4
protein activation cascade	3
protein autoubiquitination	2
protein catabolic process	4
protein folding	3
protein localization	2
protein metabolic process	4
protein modification by small protein conjugation	4
protein modification by small protein conjugation or removal	4
protein modification process	4
protein polyubiquitination	7
protein targeting to membrane	2
protein transport	2
protein ubiquitination	4
proteolysis	4
proteolysis involved in cellular protein catabolic process	4
proton transport	8
purine nucleoside triphosphate catabolic process	2
purine nucleotide catabolic process	2
purine ribonucleoside triphosphate catabolic process	2
purine ribonucleotide catabolic process	2
purine-containing compound catabolic process	2
pyrimidine nucleoside metabolic process	2
pyrimidine ribonucleoside metabolic process	2
pyrimidine-containing compound metabolic process	2
reciprocal DNA recombination	2
reciprocal meiotic recombination	2
regulation of B cell mediated immunity	2
regulation of G1/S transition of mitotic cell cycle	4
regulation of I-kappaB kinase/NF-kappaB cascade	2
regulation of JNK cascade	2
regulation of RNA biosynthetic process	10
regulation of RNA metabolic process	10
regulation of T cell activation	1
regulation of acute inflammatory response	2
regulation of adaptive immune response	2
regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains	2
regulation of apoptotic process	10
regulation of apoptotic signaling pathway	2
regulation of binding	2
regulation of biological process	10
regulation of biosynthetic process	10
regulation of calcium-mediated signaling	2
regulation of catalytic activity	10
regulation of cell activation	1
regulation of cell communication	2
regulation of cell cycle	2
regulation of cell cycle arrest	4
regulation of cell cycle process	4
regulation of cell death	10
regulation of cell growth	2
regulation of cell killing	2
regulation of cell morphogenesis	2
regulation of cell proliferation	2
regulation of cellular amine metabolic process	7
regulation of cellular amino acid metabolic process	7
regulation of cellular biosynthetic process	10
regulation of cellular ketone metabolic process	10
regulation of cellular macromolecule biosynthetic process	10
regulation of cellular metabolic process	10
regulation of cellular process	10
regulation of cellular protein metabolic process	10
regulation of cellular response to stress	2
regulation of complement activation	3
regulation of cysteine-type endopeptidase activity	2
regulation of cytokine biosynthetic process	2
regulation of defense response	2
regulation of developmental process	2
regulation of endopeptidase activity	2
regulation of epithelial cell differentiation	2
regulation of gene expression	10
regulation of gene expression, epigenetic	2
regulation of glucose transport	6
regulation of humoral immune response	3
regulation of hydrolase activity	2
regulation of immune effector process	2
regulation of immune response	1
regulation of immune system process	1
regulation of immunoglobulin mediated immune response	2
regulation of inflammatory response	2
regulation of innate immune response	2
regulation of interphase of mitotic cell cycle	4
regulation of intracellular protein transport	2
regulation of intracellular transport	2
regulation of leukocyte activation	1
regulation of leukocyte mediated cytotoxicity	2
regulation of leukocyte mediated immunity	2
regulation of ligase activity	7
regulation of lymphocyte activation	1
regulation of lymphocyte mediated immunity	2
regulation of macromolecule biosynthetic process	10
regulation of macromolecule metabolic process	10
regulation of metabolic process	10
regulation of mitotic cell cycle	4
regulation of molecular function	10
regulation of multicellular organismal process	2
regulation of nitric oxide biosynthetic process	2
regulation of nitrogen compound metabolic process	10
regulation of nucleobase-containing compound metabolic process	10
regulation of nucleocytoplasmic transport	2
regulation of pH	2
regulation of peptidase activity	2
regulation of primary metabolic process	10
regulation of programmed cell death	10
regulation of proteasomal protein catabolic process	2
regulation of protein activation cascade	3
regulation of protein binding	2
regulation of protein catabolic process	2
regulation of protein import into nucleus	2
regulation of protein localization to nucleus	2
regulation of protein metabolic process	2
regulation of protein modification process	10
regulation of protein processing	3
regulation of protein ubiquitination	4
regulation of proteolysis	2
regulation of reproductive process	2
regulation of response to external stimulus	2
regulation of response to stimulus	2
regulation of response to stress	2
regulation of sequence-specific DNA binding transcription factor activity	2
regulation of signal transduction	2
regulation of signaling	2
regulation of stress-activated MAPK cascade	2
regulation of stress-activated protein kinase signaling cascade	2
regulation of toll-like receptor signaling pathway	2
regulation of transcription from RNA polymerase II promoter	2
regulation of transcription, DNA-dependent	10
regulation of transmembrane transport	2
regulation of transporter activity	2
regulation of transposition	2
regulation of ubiquitin-protein ligase activity	7
regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	7
regulation of viral genome replication	2
regulation of viral reproduction	2
response to DNA damage stimulus	4
response to abiotic stimulus	2
response to amine stimulus	2
response to biotic stimulus	2
response to cAMP	2
response to calcium ion	2
response to chemical stimulus	2
response to cytokine stimulus	1
response to drug	2
response to estrogen stimulus	2
response to extracellular stimulus	2
response to heat	2
response to hormone stimulus	2
response to inorganic substance	2
response to insulin stimulus	2
response to interferon-gamma	1
response to interleukin-1	2
response to lithium ion	2
response to metal ion	2
response to nutrient levels	2
response to organic cyclic compound	2
response to organic substance	2
response to other organism	2
response to peptide hormone stimulus	2
response to progesterone stimulus	2
response to radiation	2
response to steroid hormone stimulus	2
response to stimulus	3
response to stress	1
response to temperature stimulus	2
response to topologically incorrect protein	2
response to tumor necrosis factor	2
response to type I interferon	1
response to unfolded protein	2
response to virus	1
ribonucleoside catabolic process	2
ribonucleoside metabolic process	2
ribonucleoside triphosphate catabolic process	2
ribonucleotide catabolic process	2
signal transduction	10
signal transduction by p53 class mediator	4
signal transduction in response to DNA damage	4
signal transduction involved in DNA damage checkpoint	7
signal transduction involved in DNA integrity checkpoint	7
signal transduction involved in G1/S transition checkpoint	7
signal transduction involved in cell cycle checkpoint	7
signal transduction involved in mitotic cell cycle G1/S checkpoint	7
signal transduction involved in mitotic cell cycle G1/S transition DNA damage checkpoint	7
signal transduction involved in mitotic cell cycle checkpoint	7
signal transduction involved in regulation of gene expression	2
signaling	10
stress-activated MAPK cascade	2
stress-activated protein kinase signaling cascade	2
system development	2
thymic T cell selection	2
transcription from RNA polymerase II promoter	2
transcription initiation from RNA polymerase II promoter	2
transcription, DNA-dependent	2
transferrin transport	8
transition metal ion transport	8
translational elongation	2
translational initiation	2
transmembrane receptor protein serine/threonine kinase signaling pathway	10
transmembrane receptor protein tyrosine kinase signaling pathway	2
transmembrane transport	3
transport	5
tumor necrosis factor-mediated signaling pathway	2
type I interferon-mediated signaling pathway	1
ubiquitin-dependent protein catabolic process	4
vasculature development	2
vesicle-mediated transport	2
viral infectious cycle	2
viral reproduction	6
viral reproductive process	2
virus-host interaction	2