'de novo' posttranslational protein folding	7
'de novo' protein folding	7
CD4-positive, alpha-beta T cell activation	2
CD4-positive, alpha-beta T cell differentiation	2
COPI coating of Golgi vesicle	4
COPI-coated vesicle budding	4
CTP biosynthetic process	7
CTP metabolic process	7
DNA alkylation	6
DNA conformation change	3
DNA damage checkpoint	6
DNA damage response, signal transduction by p53 class mediator	7
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	7
DNA integrity checkpoint	6
DNA metabolic process	6
DNA methylation	6
DNA packaging	3
DNA-dependent transcription, elongation	10
DNA-dependent transcription, initiation	3
DNA-dependent transcription, termination	10
ER to Golgi vesicle-mediated transport	4
ER-nucleus signaling pathway	1
ERBB signaling pathway	6
G-protein coupled receptor signaling pathway	8
G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger	8
G1 phase	6
G1 phase of mitotic cell cycle	6
G1/S transition checkpoint	7
G1/S transition of mitotic cell cycle	7
GTP biosynthetic process	7
GTP catabolic process	4
GTP metabolic process	10
Golgi organization	4
Golgi transport vesicle coating	4
Golgi vesicle budding	4
Golgi vesicle transport	4
I-kappaB kinase/NF-kappaB cascade	9
JAK-STAT cascade	7
JNK cascade	9
M/G1 transition of mitotic cell cycle	6
MAPK cascade	9
MyD88-dependent toll-like receptor signaling pathway	9
MyD88-independent toll-like receptor signaling pathway	1
Notch signaling pathway	2
RNA biosynthetic process	1
RNA catabolic process	7
RNA localization	7
RNA metabolic process	1
RNA processing	10
RNA splicing	9
RNA splicing, via transesterification reactions	9
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	9
RNA transport	7
S phase	6
S phase of mitotic cell cycle	6
SMAD protein signal transduction	5
SRP-dependent cotranslational protein targeting to membrane	9
T cell activation	1
T cell activation involved in immune response	2
T cell differentiation	1
T cell receptor signaling pathway	6
TRIF-dependent toll-like receptor signaling pathway	1
Toll signaling pathway	1
UTP biosynthetic process	7
UTP metabolic process	10
actin filament capping	4
activation of adenylate cyclase activity	8
activation of immune response	1
activation of innate immune response	1
activation of phospholipase C activity	6
activation of protein kinase activity	7
activation of signaling protein activity involved in unfolded protein response	1
adenylate cyclase-activating G-protein coupled receptor signaling pathway	8
adenylate cyclase-modulating G-protein coupled receptor signaling pathway	8
alpha-beta T cell activation	1
alpha-beta T cell differentiation	2
ameboidal cell migration	1
amine metabolic process	4
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	6
anatomical structure development	1
anatomical structure formation involved in morphogenesis	1
anatomical structure morphogenesis	1
anterior/posterior pattern specification	1
antigen processing and presentation	9
antigen processing and presentation of exogenous antigen	6
antigen processing and presentation of exogenous peptide antigen	6
antigen processing and presentation of exogenous peptide antigen via MHC class I	9
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	9
antigen processing and presentation of peptide antigen	6
antigen processing and presentation of peptide antigen via MHC class I	9
antigen receptor-mediated signaling pathway	6
apoptotic process	7
appendage development	2
appendage morphogenesis	2
artery development	1
associative learning	7
autonomic nervous system development	1
axis specification	2
axon ensheathment	1
axon guidance	1
axonogenesis	1
biological regulation	1
biosynthetic process	1
blastocyst development	1
blastocyst formation	1
blood coagulation	5
blood vessel development	1
blood vessel morphogenesis	1
bone development	1
bone morphogenesis	1
brain development	1
branching involved in mammary gland duct morphogenesis	2
branching involved in ureteric bud morphogenesis	1
branching morphogenesis of a tube	1
brown fat cell differentiation	8
cAMP-mediated signaling	8
calcium ion homeostasis	8
camera-type eye development	1
camera-type eye morphogenesis	1
carbohydrate derivative metabolic process	10
carbohydrate homeostasis	7
cardiac cell differentiation	1
cardiac muscle cell differentiation	1
cardiovascular system development	1
cartilage development	1
cartilage morphogenesis	1
catabolic process	6
cation transport	8
cell activation	2
cell communication	3
cell cycle checkpoint	6
cell development	1
cell differentiation	1
cell differentiation in spinal cord	1
cell fate commitment	1
cell fate commitment involved in formation of primary germ layer	1
cell fate determination	1
cell fate specification	1
cell maturation	1
cell migration	1
cell morphogenesis	1
cell morphogenesis involved in differentiation	1
cell morphogenesis involved in neuron differentiation	1
cell motility	1
cell part morphogenesis	1
cell projection morphogenesis	1
cell projection organization	1
cell proliferation	1
cell surface receptor signaling pathway	6
cell-cell signaling	8
cell-cell signaling involved in cell fate commitment	1
cellular aldehyde metabolic process	8
cellular aromatic compound metabolic process	3
cellular biosynthetic process	1
cellular calcium ion homeostasis	8
cellular catabolic process	6
cellular component assembly	3
cellular component assembly at cellular level	3
cellular component biogenesis	3
cellular component biogenesis at cellular level	8
cellular component disassembly	7
cellular component disassembly at cellular level	7
cellular component morphogenesis	1
cellular component organization	3
cellular component organization at cellular level	3
cellular component organization or biogenesis	3
cellular component organization or biogenesis at cellular level	3
cellular developmental process	1
cellular divalent inorganic cation homeostasis	8
cellular lipid metabolic process	3
cellular localization	4
cellular macromolecular complex assembly	3
cellular macromolecular complex disassembly	7
cellular macromolecular complex subunit organization	3
cellular macromolecule biosynthetic process	1
cellular macromolecule catabolic process	6
cellular macromolecule localization	4
cellular macromolecule metabolic process	1
cellular membrane fusion	4
cellular membrane organization	4
cellular metabolic process	5
cellular nitrogen compound metabolic process	1
cellular process	1
cellular process involved in reproduction	7
cellular protein catabolic process	6
cellular protein complex disassembly	6
cellular protein localization	4
cellular protein metabolic process	10
cellular protein modification process	6
cellular response to UV	2
cellular response to abiotic stimulus	1
cellular response to biotic stimulus	1
cellular response to calcium ion	1
cellular response to chemical stimulus	1
cellular response to cytokine stimulus	7
cellular response to drug	1
cellular response to endogenous stimulus	1
cellular response to external stimulus	3
cellular response to extracellular stimulus	3
cellular response to fibroblast growth factor stimulus	6
cellular response to growth factor stimulus	1
cellular response to growth hormone stimulus	6
cellular response to hormone stimulus	5
cellular response to inorganic substance	1
cellular response to insulin stimulus	5
cellular response to interferon-gamma	3
cellular response to interleukin-1	1
cellular response to light stimulus	2
cellular response to lipopolysaccharide	1
cellular response to metal ion	1
cellular response to nutrient	1
cellular response to organic cyclic compound	9
cellular response to organic substance	1
cellular response to peptide hormone stimulus	7
cellular response to radiation	1
cellular response to starvation	3
cellular response to steroid hormone stimulus	1
cellular response to stimulus	3
cellular response to topologically incorrect protein	1
cellular response to type I interferon	3
cellular response to unfolded protein	1
central nervous system development	1
central nervous system neuron development	1
central nervous system neuron differentiation	1
ceramide biosynthetic process	10
ceramide metabolic process	10
cerebellum development	1
cerebral cortex development	1
chemotaxis	1
chordate embryonic development	1
chromatin assembly	3
chromatin assembly or disassembly	3
chromatin modification	3
chromatin organization	3
chromatin remodeling	3
chromatin silencing	2
chromosome organization	3
circulatory system development	1
coagulation	5
columnar/cuboidal epithelial cell differentiation	1
connective tissue development	1
cotranslational protein targeting to membrane	9
covalent chromatin modification	6
cyclic-nucleotide-mediated signaling	8
cytokine production	1
cytokine-mediated signaling pathway	7
cytoplasmic pattern recognition receptor signaling pathway	6
cytosolic calcium ion homeostasis	8
defense response	3
definitive hemopoiesis	5
dephosphorylation	10
determination of bilateral symmetry	1
determination of heart left/right asymmetry	1
determination of left/right symmetry	1
developmental growth	1
developmental growth involved in morphogenesis	1
developmental induction	1
developmental pigmentation	1
developmental process	1
developmental process involved in reproduction	1
diencephalon development	1
digestive system development	9
digestive tract development	1
digestive tract morphogenesis	9
divalent inorganic cation homeostasis	8
dorsal spinal cord development	1
dorsal/ventral pattern formation	2
ear development	1
ear morphogenesis	1
egress of virus within host cell	9
elevation of cytosolic calcium ion concentration	8
embryo development	1
embryo development ending in birth or egg hatching	1
embryonic appendage morphogenesis	2
embryonic camera-type eye development	1
embryonic camera-type eye morphogenesis	1
embryonic cranial skeleton morphogenesis	1
embryonic digit morphogenesis	2
embryonic epithelial tube formation	1
embryonic eye morphogenesis	1
embryonic heart tube development	1
embryonic heart tube morphogenesis	1
embryonic limb morphogenesis	2
embryonic morphogenesis	1
embryonic organ development	1
embryonic organ morphogenesis	1
embryonic pattern specification	2
embryonic placenta development	1
embryonic skeletal system development	1
embryonic skeletal system morphogenesis	1
endocardial cushion development	1
endocardial cushion formation	1
endocardial cushion morphogenesis	1
endochondral bone morphogenesis	1
endocrine pancreas development	1
endocrine system development	1
endocytosis	8
endoderm development	2
endoderm formation	2
endoplasmic reticulum unfolded protein response	1
endosomal transport	1
energy derivation by oxidation of organic compounds	10
ensheathment of neurons	1
enzyme linked receptor protein signaling pathway	6
epidermal cell differentiation	1
epidermal growth factor receptor signaling pathway	6
epidermis development	1
epithelial cell development	1
epithelial cell differentiation	1
epithelial cell differentiation involved in prostate gland development	1
epithelial cell maturation	1
epithelial cell proliferation	1
epithelial to mesenchymal transition	1
epithelial tube formation	1
epithelial tube morphogenesis	1
epithelium development	1
erythrocyte differentiation	1
erythrocyte homeostasis	1
establishment of RNA localization	7
establishment of localization	4
establishment of localization in cell	4
establishment of organelle localization	4
establishment of protein localization	4
establishment of protein localization in endoplasmic reticulum	9
establishment of protein localization in membrane	4
establishment of protein localization in plasma membrane	4
establishment of protein localization to organelle	9
establishment of vesicle localization	4
ethanolamine-containing compound metabolic process	4
exocrine system development	7
eye development	1
eye morphogenesis	1
eye photoreceptor cell differentiation	1
eyelid development in camera-type eye	2
fat cell differentiation	3
female pregnancy	2
fibroblast growth factor receptor signaling pathway	6
forebrain cell migration	1
forebrain development	1
forelimb morphogenesis	1
formation of primary germ layer	1
gastrulation	1
gastrulation with mouth forming second	2
gene expression	1
gene silencing	3
generation of neurons	1
gland development	1
gland morphogenesis	1
glial cell development	5
glial cell differentiation	1
gliogenesis	1
glucose homeostasis	7
glycerolipid metabolic process	10
glycerophospholipid biosynthetic process	4
glycerophospholipid metabolic process	4
glycolipid metabolic process	8
glycosphingolipid metabolic process	8
glycosylation	4
growth	1
growth hormone receptor signaling pathway	6
guanosine-containing compound biosynthetic process	7
guanosine-containing compound catabolic process	4
guanosine-containing compound metabolic process	10
heart development	1
heart looping	1
heart morphogenesis	1
heart valve development	1
heart valve morphogenesis	1
hemopoiesis	1
hemopoietic or lymphoid organ development	1
hemostasis	5
hepaticobiliary system development	1
heterocycle metabolic process	10
hindbrain development	1
histone H4 deacetylation	2
histone deacetylation	3
homeostasis of number of cells	1
immune response	7
immune response-activating cell surface receptor signaling pathway	6
immune response-activating signal transduction	1
immune response-regulating cell surface receptor signaling pathway	6
immune response-regulating signaling pathway	1
immune system development	1
immune system process	1
in utero embryonic development	1
induction of apoptosis	7
induction of programmed cell death	7
innate immune response	9
innate immune response-activating signal transduction	1
inner ear development	1
inner ear morphogenesis	1
insulin receptor signaling pathway	5
interferon-gamma-mediated signaling pathway	3
interphase	7
interphase of mitotic cell cycle	7
interspecies interaction between organisms	5
intestinal epithelial cell differentiation	1
intra-Golgi vesicle-mediated transport	4
intracellular protein kinase cascade	7
intracellular protein transport	4
intracellular receptor mediated signaling pathway	1
intracellular signal transduction	7
intracellular transport	4
kidney development	1
kidney epithelium development	1
lens development in camera-type eye	5
lens morphogenesis in camera-type eye	1
leukocyte activation	1
leukocyte differentiation	1
limb development	2
limb morphogenesis	2
limbic system development	1
lipid biosynthetic process	8
lipid catabolic process	4
lipid metabolic process	3
liver development	1
localization	2
localization of cell	1
locomotion	1
lung cell differentiation	1
lung epithelial cell differentiation	1
lung epithelium development	1
lymphocyte activation	1
lymphocyte differentiation	2
mRNA catabolic process	7
mRNA metabolic process	9
mRNA processing	9
mRNA transport	7
macromolecular complex assembly	3
macromolecular complex disassembly	7
macromolecular complex subunit organization	3
macromolecule biosynthetic process	1
macromolecule catabolic process	6
macromolecule localization	4
macromolecule metabolic process	1
macromolecule methylation	6
macromolecule modification	6
maintenance of location in cell	1
maintenance of protein location in cell	1
male gonad development	1
mammary gland alveolus development	2
mammary gland development	1
mammary gland duct morphogenesis	2
mammary gland epithelial cell differentiation	1
mammary gland epithelium development	1
mammary gland lobule development	2
mammary gland morphogenesis	1
melanocyte differentiation	1
membrane budding	4
membrane fusion	4
membrane lipid biosynthetic process	8
membrane lipid metabolic process	8
membrane organization	4
mesenchymal cell development	1
mesenchymal cell differentiation	1
mesenchyme development	1
mesenchyme morphogenesis	1
mesoderm development	1
mesoderm morphogenesis	1
metabolic process	5
metal ion transport	8
metanephros development	1
metencephalon development	1
methylation	6
microtubule-based movement	4
midbrain development	1
middle ear morphogenesis	1
mitotic cell cycle G1/S transition DNA damage checkpoint	7
mitotic cell cycle G1/S transition checkpoint	7
mitotic cell cycle checkpoint	7
modification-dependent macromolecule catabolic process	6
modification-dependent protein catabolic process	6
modulation by host of symbiont transcription	2
modulation by host of viral transcription	2
modulation of transcription in other organism involved in symbiotic interaction	2
monocyte differentiation	1
morphogenesis of a branching epithelium	1
morphogenesis of a branching structure	1
morphogenesis of an epithelium	1
morphogenesis of embryonic epithelium	1
motor axon guidance	1
multi-organism process	3
multicellular organismal development	1
multicellular organismal process	1
muscle adaptation	9
muscle cell differentiation	1
muscle organ development	1
muscle structure development	1
myelination	1
myeloid cell differentiation	1
myeloid leukocyte differentiation	1
negative regulation of DNA binding	1
negative regulation of ERBB signaling pathway	9
negative regulation of RNA metabolic process	1
negative regulation of Wnt receptor signaling pathway	2
negative regulation of actin filament depolymerization	4
negative regulation of actin filament polymerization	4
negative regulation of apoptotic process	1
negative regulation of biological process	1
negative regulation of biosynthetic process	2
negative regulation of catabolic process	2
negative regulation of cell communication	1
negative regulation of cell cycle	3
negative regulation of cell death	1
negative regulation of cell differentiation	1
negative regulation of cell proliferation	1
negative regulation of cellular biosynthetic process	2
negative regulation of cellular component organization	2
negative regulation of cellular macromolecule biosynthetic process	1
negative regulation of cellular metabolic process	2
negative regulation of cellular process	1
negative regulation of cytokine production	7
negative regulation of developmental process	1
negative regulation of epidermal growth factor receptor signaling pathway	9
negative regulation of epithelial cell proliferation	1
negative regulation of gene expression	1
negative regulation of ligase activity	6
negative regulation of macromolecule biosynthetic process	1
negative regulation of macromolecule metabolic process	1
negative regulation of metabolic process	2
negative regulation of molecular function	1
negative regulation of multicellular organismal process	7
negative regulation of muscle cell differentiation	2
negative regulation of myotube differentiation	2
negative regulation of neuron differentiation	1
negative regulation of nitrogen compound metabolic process	1
negative regulation of nucleobase-containing compound metabolic process	1
negative regulation of organelle organization	2
negative regulation of programmed cell death	1
negative regulation of protein complex assembly	1
negative regulation of protein complex disassembly	2
negative regulation of protein polymerization	4
negative regulation of protein ubiquitination	6
negative regulation of response to cytokine stimulus	5
negative regulation of response to stimulus	1
negative regulation of sequence-specific DNA binding transcription factor activity	2
negative regulation of signal transduction	1
negative regulation of signaling	1
negative regulation of skeletal muscle cell differentiation	2
negative regulation of striated muscle cell differentiation	2
negative regulation of transcription from RNA polymerase II promoter	1
negative regulation of transcription regulatory region DNA binding	1
negative regulation of transcription, DNA-dependent	1
negative regulation of transposition	4
negative regulation of type I interferon production	6
negative regulation of ubiquitin-protein ligase activity	6
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	6
nephron development	1
nephron epithelium development	1
nephron tubule development	1
nerve growth factor receptor signaling pathway	9
nervous system development	1
neural crest cell development	1
neural crest cell differentiation	1
neural crest cell migration	1
neural precursor cell proliferation	1
neural tube development	1
neurogenesis	1
neuron development	1
neuron differentiation	1
neuron fate commitment	1
neuron fate specification	1
neuron migration	1
neuron projection development	1
neuron projection morphogenesis	1
nitrogen compound metabolic process	1
nose development	1
nuclear mRNA splicing, via spliceosome	9
nuclear-transcribed mRNA catabolic process	6
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	6
nucleic acid metabolic process	1
nucleic acid transport	7
nucleobase-containing compound metabolic process	1
nucleobase-containing compound transport	10
nucleobase-containing small molecule interconversion	10
nucleobase-containing small molecule metabolic process	10
nucleoside biosynthetic process	7
nucleoside catabolic process	4
nucleoside diphosphate metabolic process	10
nucleoside metabolic process	10
nucleoside phosphate metabolic process	10
nucleoside triphosphate biosynthetic process	10
nucleoside triphosphate metabolic process	10
nucleosome assembly	3
nucleosome organization	3
nucleotide metabolic process	10
nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway	6
nucleotide-binding oligomerization domain containing signaling pathway	6
odontogenesis	1
organ development	1
organ formation	1
organ morphogenesis	1
organelle fusion	4
organelle localization	1
organelle organization	3
organic substance metabolic process	10
organophosphate metabolic process	4
ossification	1
osteoblast differentiation	1
otic vesicle development	1
outflow tract morphogenesis	1
palate development	6
pallium development	1
pancreas development	1
pattern recognition receptor signaling pathway	1
pattern specification process	1
patterning of blood vessels	2
peptidyl-tyrosine modification	6
peptidyl-tyrosine phosphorylation	6
peripheral nervous system development	1
phosphate-containing compound metabolic process	10
phospholipid biosynthetic process	4
phospholipid catabolic process	10
phospholipid metabolic process	4
phosphorus metabolic process	10
phosphorylation	6
photoreceptor cell differentiation	1
pigment cell differentiation	1
pigmentation	1
pituitary gland development	1
placenta development	1
platelet activation	7
positive regulation of ERK1 and ERK2 cascade	7
positive regulation of MAP kinase activity	9
positive regulation of NF-kappaB transcription factor activity	9
positive regulation of RNA metabolic process	1
positive regulation of T cell activation	7
positive regulation of T cell differentiation	7
positive regulation of T cell proliferation	7
positive regulation of Wnt receptor signaling pathway	5
positive regulation of adenylate cyclase activity	8
positive regulation of apoptotic process	1
positive regulation of apoptotic signaling pathway	3
positive regulation of binding	9
positive regulation of biological process	1
positive regulation of biosynthetic process	1
positive regulation of cAMP biosynthetic process	8
positive regulation of cAMP metabolic process	8
positive regulation of catalytic activity	7
positive regulation of cell activation	7
positive regulation of cell cycle arrest	7
positive regulation of cell cycle process	7
positive regulation of cell death	1
positive regulation of cell development	1
positive regulation of cell differentiation	1
positive regulation of cell proliferation	1
positive regulation of cellular biosynthetic process	1
positive regulation of cellular carbohydrate metabolic process	8
positive regulation of cellular component organization	3
positive regulation of cellular metabolic process	1
positive regulation of cellular process	1
positive regulation of cellular protein metabolic process	7
positive regulation of chromosome organization	3
positive regulation of cyclase activity	8
positive regulation of cyclic nucleotide biosynthetic process	8
positive regulation of cyclic nucleotide metabolic process	8
positive regulation of developmental process	1
positive regulation of epithelial cell proliferation	2
positive regulation of epithelial to mesenchymal transition	2
positive regulation of extrinsic apoptotic signaling pathway	3
positive regulation of fat cell differentiation	6
positive regulation of gene expression	1
positive regulation of glial cell differentiation	9
positive regulation of gliogenesis	1
positive regulation of histone modification	3
positive regulation of immune response	6
positive regulation of immune system process	7
positive regulation of kinase activity	7
positive regulation of leukocyte activation	7
positive regulation of leukocyte proliferation	7
positive regulation of ligase activity	6
positive regulation of lipase activity	6
positive regulation of lyase activity	8
positive regulation of lymphocyte activation	7
positive regulation of lymphocyte differentiation	7
positive regulation of lymphocyte proliferation	7
positive regulation of macromolecule biosynthetic process	1
positive regulation of macromolecule metabolic process	1
positive regulation of mesenchymal cell proliferation	1
positive regulation of metabolic process	1
positive regulation of molecular function	7
positive regulation of mononuclear cell proliferation	7
positive regulation of multicellular organismal process	1
positive regulation of myeloid cell differentiation	5
positive regulation of neural precursor cell proliferation	1
positive regulation of neuron differentiation	1
positive regulation of nitrogen compound metabolic process	1
positive regulation of nuclease activity	1
positive regulation of nucleobase-containing compound metabolic process	1
positive regulation of nucleotide biosynthetic process	8
positive regulation of nucleotide metabolic process	8
positive regulation of osteoblast differentiation	1
positive regulation of phosphate metabolic process	7
positive regulation of phospholipase C activity	6
positive regulation of phospholipase activity	6
positive regulation of phosphorus metabolic process	7
positive regulation of phosphorylation	7
positive regulation of programmed cell death	1
positive regulation of protein binding	9
positive regulation of protein complex assembly	3
positive regulation of protein kinase activity	7
positive regulation of protein metabolic process	7
positive regulation of protein modification process	7
positive regulation of protein phosphorylation	7
positive regulation of protein serine/threonine kinase activity	7
positive regulation of protein ubiquitination	6
positive regulation of purine nucleotide biosynthetic process	8
positive regulation of purine nucleotide metabolic process	8
positive regulation of reproductive process	2
positive regulation of sequence-specific DNA binding transcription factor activity	9
positive regulation of transcription from RNA polymerase II promoter	1
positive regulation of transcription, DNA-dependent	1
positive regulation of transferase activity	7
positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	3
positive regulation of ubiquitin-protein ligase activity	6
positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	6
positive regulation of viral reproduction	2
positive regulation of viral transcription	9
post-Golgi vesicle-mediated transport	1
primary metabolic process	5
prostate gland development	1
prostate gland epithelium morphogenesis	1
prostate gland morphogenesis	1
prostate glandular acinus development	1
proteasomal protein catabolic process	6
proteasomal ubiquitin-dependent protein catabolic process	6
protein autophosphorylation	10
protein catabolic process	6
protein complex disassembly	6
protein deacetylation	3
protein deacylation	3
protein dephosphorylation	7
protein deubiquitination	6
protein folding	5
protein localization	4
protein localization in endoplasmic reticulum	9
protein localization to nucleus	7
protein localization to organelle	7
protein metabolic process	6
protein modification by small protein conjugation	6
protein modification by small protein conjugation or removal	6
protein modification by small protein removal	6
protein modification process	6
protein phosphorylation	6
protein polyubiquitination	6
protein stabilization	1
protein targeting	7
protein targeting to ER	9
protein targeting to membrane	4
protein targeting to plasma membrane	4
protein transport	4
protein ubiquitination	6
protein-DNA complex assembly	3
protein-DNA complex subunit organization	3
proteolysis	6
proteolysis involved in cellular protein catabolic process	6
proximal/distal pattern formation	1
purine nucleoside biosynthetic process	7
purine nucleoside catabolic process	4
purine nucleoside metabolic process	10
purine nucleoside triphosphate biosynthetic process	10
purine nucleoside triphosphate metabolic process	7
purine ribonucleoside biosynthetic process	7
purine ribonucleoside catabolic process	4
purine ribonucleoside metabolic process	10
purine ribonucleoside triphosphate biosynthetic process	10
purine ribonucleoside triphosphate metabolic process	7
purine ribonucleotide biosynthetic process	10
purine ribonucleotide metabolic process	10
purine-containing compound metabolic process	10
pyrimidine nucleoside metabolic process	10
pyrimidine nucleoside triphosphate biosynthetic process	7
pyrimidine nucleoside triphosphate metabolic process	10
pyrimidine nucleotide biosynthetic process	7
pyrimidine nucleotide metabolic process	10
pyrimidine ribonucleoside metabolic process	10
pyrimidine ribonucleoside triphosphate biosynthetic process	7
pyrimidine ribonucleoside triphosphate metabolic process	10
pyrimidine ribonucleotide biosynthetic process	7
pyrimidine ribonucleotide metabolic process	10
pyrimidine-containing compound biosynthetic process	7
pyrimidine-containing compound metabolic process	10
receptor internalization	8
receptor metabolic process	8
receptor-mediated endocytosis	8
regionalization	1
regulation of BMP signaling pathway	3
regulation of DNA binding	1
regulation of ERBB signaling pathway	7
regulation of ERK1 and ERK2 cascade	7
regulation of G1/S transition of mitotic cell cycle	7
regulation of Notch signaling pathway	1
regulation of RNA biosynthetic process	1
regulation of RNA metabolic process	1
regulation of T cell activation	7
regulation of T cell differentiation	7
regulation of T cell proliferation	7
regulation of T-helper cell differentiation	3
regulation of Wnt receptor signaling pathway	2
regulation of actin cytoskeleton organization	1
regulation of actin filament depolymerization	4
regulation of actin filament length	4
regulation of actin filament polymerization	4
regulation of actin filament-based process	1
regulation of actin polymerization or depolymerization	4
regulation of action potential	1
regulation of action potential in neuron	1
regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains	6
regulation of adenylate cyclase activity	8
regulation of anatomical structure morphogenesis	1
regulation of anti-apoptosis	5
regulation of apoptotic process	1
regulation of apoptotic signaling pathway	3
regulation of binding	3
regulation of biological process	1
regulation of biomineral tissue development	1
regulation of biosynthetic process	1
regulation of bone mineralization	1
regulation of bone remodeling	8
regulation of bone resorption	8
regulation of cAMP biosynthetic process	8
regulation of cAMP metabolic process	8
regulation of canonical Wnt receptor signaling pathway	2
regulation of carbohydrate metabolic process	4
regulation of cardiac muscle cell proliferation	1
regulation of cardiac muscle tissue development	1
regulation of cardiac muscle tissue growth	1
regulation of cartilage development	1
regulation of cell communication	1
regulation of cell cycle	3
regulation of cell cycle arrest	6
regulation of cell cycle process	6
regulation of cell death	1
regulation of cell development	1
regulation of cell differentiation	1
regulation of cell proliferation	1
regulation of cellular biosynthetic process	1
regulation of cellular carbohydrate metabolic process	4
regulation of cellular component biogenesis	1
regulation of cellular component movement	3
regulation of cellular component size	1
regulation of cellular ketone metabolic process	3
regulation of cellular macromolecule biosynthetic process	1
regulation of cellular metabolic process	1
regulation of cellular process	1
regulation of cellular protein metabolic process	7
regulation of chondrocyte differentiation	1
regulation of circadian rhythm	6
regulation of cyclase activity	8
regulation of cyclic nucleotide biosynthetic process	8
regulation of cyclic nucleotide metabolic process	8
regulation of cytokine production	1
regulation of defense response	9
regulation of defense response to virus by virus	9
regulation of developmental growth	1
regulation of developmental process	1
regulation of embryonic development	1
regulation of epidermal growth factor receptor signaling pathway	7
regulation of epithelial cell differentiation	5
regulation of epithelial cell proliferation	1
regulation of erythrocyte differentiation	1
regulation of extrinsic apoptotic signaling pathway	3
regulation of fat cell differentiation	3
regulation of gene expression	1
regulation of generation of precursor metabolites and energy	4
regulation of glial cell differentiation	1
regulation of gliogenesis	1
regulation of glucose metabolic process	4
regulation of glucose transport	10
regulation of heart growth	1
regulation of immune effector process	3
regulation of immune response	9
regulation of immune system process	1
regulation of innate immune response	1
regulation of interphase of mitotic cell cycle	1
regulation of intracellular protein kinase cascade	9
regulation of kidney development	1
regulation of kinase activity	7
regulation of leukocyte proliferation	7
regulation of ligase activity	6
regulation of lipase activity	6
regulation of lipid metabolic process	3
regulation of lyase activity	8
regulation of lymphocyte differentiation	7
regulation of lymphocyte proliferation	7
regulation of macromolecule biosynthetic process	1
regulation of macromolecule metabolic process	1
regulation of mesenchymal cell proliferation	1
regulation of metabolic process	1
regulation of mitotic cell cycle	1
regulation of molecular function	1
regulation of mononuclear cell proliferation	7
regulation of morphogenesis of a branching structure	1
regulation of multi-organism process	3
regulation of multicellular organismal development	1
regulation of multicellular organismal process	1
regulation of muscle cell differentiation	1
regulation of muscle organ development	3
regulation of myeloid cell differentiation	1
regulation of myotube differentiation	2
regulation of nervous system development	1
regulation of neural precursor cell proliferation	1
regulation of neurogenesis	1
regulation of neuron differentiation	1
regulation of nitrogen compound metabolic process	1
regulation of nuclease activity	1
regulation of nucleobase-containing compound metabolic process	1
regulation of nucleotide biosynthetic process	8
regulation of nucleotide metabolic process	8
regulation of organ growth	1
regulation of organ morphogenesis	1
regulation of ossification	1
regulation of osteoblast differentiation	1
regulation of phosphate metabolic process	7
regulation of phospholipase C activity	6
regulation of phospholipase activity	6
regulation of phosphorus metabolic process	7
regulation of phosphorylation	7
regulation of primary metabolic process	1
regulation of programmed cell death	1
regulation of protein binding	9
regulation of protein complex assembly	1
regulation of protein complex disassembly	2
regulation of protein deacetylation	3
regulation of protein kinase activity	7
regulation of protein metabolic process	7
regulation of protein modification process	7
regulation of protein phosphorylation	7
regulation of protein polymerization	4
regulation of protein stability	2
regulation of protein ubiquitination	6
regulation of purine nucleotide biosynthetic process	8
regulation of purine nucleotide metabolic process	8
regulation of reactive oxygen species metabolic process	2
regulation of reproductive process	2
regulation of response to stimulus	3
regulation of sequence-specific DNA binding transcription factor activity	1
regulation of signal transduction	3
regulation of signaling	1
regulation of skeletal muscle cell differentiation	6
regulation of skeletal muscle fiber development	3
regulation of skeletal muscle tissue development	3
regulation of small GTPase mediated signal transduction	10
regulation of smoothened signaling pathway	2
regulation of striated muscle cell differentiation	3
regulation of striated muscle tissue development	3
regulation of survival gene product expression	1
regulation of transcription from RNA polymerase II promoter	1
regulation of transcription involved in cell fate commitment	1
regulation of transcription regulatory region DNA binding	1
regulation of transcription, DNA-dependent	1
regulation of transferase activity	7
regulation of transforming growth factor beta receptor signaling pathway	3
regulation of translation	7
regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	3
regulation of transposition	4
regulation of type I interferon production	1
regulation of ubiquitin-protein ligase activity	6
regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	6
regulation of viral reproduction	6
regulation of viral transcription	2
renal system development	1
renal tubule development	1
renal tubule morphogenesis	1
reproduction	7
reproductive process	7
reproductive structure development	1
respiratory system development	1
response to biotic stimulus	3
response to cAMP	3
response to chemical stimulus	1
response to cytokine stimulus	7
response to dsRNA	2
response to endogenous stimulus	1
response to endoplasmic reticulum stress	1
response to external stimulus	1
response to extracellular stimulus	5
response to fibroblast growth factor stimulus	6
response to growth factor stimulus	1
response to growth hormone stimulus	6
response to hormone stimulus	5
response to inorganic substance	5
response to insulin stimulus	5
response to interferon-gamma	3
response to interleukin-1	1
response to lipid	6
response to lipopolysaccharide	1
response to metal ion	1
response to molecule of bacterial origin	1
response to nutrient	5
response to nutrient levels	5
response to organic substance	1
response to other organism	3
response to oxidative stress	5
response to peptide hormone stimulus	5
response to starvation	3
response to steroid hormone stimulus	1
response to stimulus	3
response to temperature stimulus	5
response to topologically incorrect protein	1
response to type I interferon	3
response to unfolded protein	1
response to virus	3
response to vitamin	1
retina development in camera-type eye	1
retrograde transport, endosome to Golgi	4
retrograde vesicle-mediated transport, Golgi to ER	4
rhombomere development	2
rhythmic process	1
ribonucleoprotein complex assembly	8
ribonucleoprotein complex biogenesis	8
ribonucleoprotein complex subunit organization	8
ribonucleoside biosynthetic process	7
ribonucleoside catabolic process	4
ribonucleoside metabolic process	10
ribonucleoside triphosphate biosynthetic process	10
ribonucleoside triphosphate metabolic process	7
ribonucleotide biosynthetic process	10
ribonucleotide metabolic process	10
salivary gland development	7
salivary gland morphogenesis	7
sensory organ development	1
sensory perception of light stimulus	6
sex differentiation	1
signal transduction	3
signal transduction by p53 class mediator	7
signal transduction in response to DNA damage	7
signal transduction involved in DNA damage checkpoint	7
signal transduction involved in DNA integrity checkpoint	7
signal transduction involved in G1/S transition checkpoint	7
signal transduction involved in cell cycle checkpoint	7
signal transduction involved in mitotic cell cycle G1/S checkpoint	7
signal transduction involved in mitotic cell cycle G1/S transition DNA damage checkpoint	7
signal transduction involved in mitotic cell cycle checkpoint	7
signal transduction involved in regulation of gene expression	1
signaling	3
skeletal system development	1
skeletal system morphogenesis	1
skin development	2
small molecule metabolic process	10
smooth muscle cell differentiation	1
smooth muscle tissue development	1
specification of symmetry	1
sphingoid biosynthetic process	10
sphingoid metabolic process	8
sphingolipid biosynthetic process	8
sphingolipid metabolic process	8
spinal cord development	1
spleen development	1
stem cell differentiation	1
steroid hormone mediated signaling pathway	9
stress-activated MAPK cascade	9
stress-activated protein kinase signaling cascade	9
sympathetic nervous system development	1
system development	1
taxis	1
telencephalon development	1
tissue development	1
tissue morphogenesis	1
toll-like receptor 1 signaling pathway	9
toll-like receptor 2 signaling pathway	9
toll-like receptor 3 signaling pathway	1
toll-like receptor 4 signaling pathway	1
toll-like receptor signaling pathway	1
transcription elongation from RNA polymerase II promoter	9
transcription from RNA polymerase II promoter	1
transcription from RNA polymerase III promoter	10
transcription initiation from RNA polymerase II promoter	3
transcription, DNA-dependent	1
transcription-coupled nucleotide-excision repair	10
transforming growth factor beta receptor signaling pathway	2
translation	10
translational elongation	7
translational initiation	9
translational termination	6
transmembrane receptor protein serine/threonine kinase signaling pathway	2
transmembrane receptor protein tyrosine kinase signaling pathway	6
transport	4
trophectodermal cell differentiation	1
tube development	1
tube formation	1
tube morphogenesis	1
type I interferon-mediated signaling pathway	3
ubiquitin-dependent protein catabolic process	6
ureteric bud development	1
ureteric bud morphogenesis	1
urogenital system development	1
vasculature development	1
ventral spinal cord development	1
ventricular cardiac muscle cell differentiation	1
vesicle coating	4
vesicle fusion	4
vesicle localization	4
vesicle organization	4
vesicle targeting	4
vesicle targeting, to, from or within Golgi	4
vesicle-mediated transport	4
viral assembly, maturation, egress, and release	9
viral genome expression	6
viral infectious cycle	6
viral reproduction	9
viral reproductive process	9
viral transcription	6
visual perception	6
white fat cell differentiation	3
wound healing	5